Pseudomonas fluorescens C2, NL64_RS07545

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain C2 contig_8, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CCCTGGCATGTGGCAGCGCGCGCTTGCTCTGCGAGCTGATCGGCAAGGGTCAACCTTCCATCGAACTGCACGGTTTCAGCCATCGGGCTGCGTGAATTCC TGTTTCTCCAGAGGACTCTGCAATGACCATTCAACGTCTCCACAGCAACTCGCGACTGTCCGGCGTCGTGACTTTCGGCGATCTGGTGTTTCTCTCCGGA CAGGTACCGGGCGAGGCCACTGACGCCAGCAACCAGACCCGTGAAGTGTTGGCGAAAATCGACGCTTTGTTGACCGAGGCCGGCAGCGACAAGAGTCATC TGCTCAATGCGACCATTTACCTCAAGGACATCAACGCGGATTTCGCCGCGATGAACGAGGTCTGGTCGCAGTGGTTGTCACCGGGCCAGGCACCGACCCG CACTACCGTGCAGGCGCAACTGGCCCGCCCTGAAATCCTGGTGGAAATCACTGTGATCGCCGCCCGCCGTTAACCGCTCTACCCACAACGGAGAATAACA
DNA Sequence for Gene
>NL64_RS07545
ATGCAAAAAAAAATCACGTTGCTTGGCTGCACCCTGGGCTTGCTGATGGGCAGTCAGGTCCAGGCCACTGAACCACCTTTGAGCGGAACGTTGGGCAAAA TCGCCAGTACCAAGAGCATCACCCTGGGCTATCGAGATGCGTCAGTACCGTTCTCCTACGTGGGTGACCACACGGGCAAGCCGATGGGTTATTCGGTGGA TCTGGCGGGCAAGATCGTCGAACGCATCCAGCAGCAACTGGCGTTGCCCGATCTCAACGTTCAGTACAACCTGGTGACTTCTCAAACCCGCATTCCGCTG GTGCAGAACGGCACCGTAGATCTGGAGTGTGGTTCCACAGGCGTGACCGCCGAGCGGCAGAAGCAGGTGGCGTTCTCCTACGGTTTCATTTACGTCAAAG GCCAGTTGCTCACGGCCAGAGACAGCGGCATCAAGAGTTTCGCCGACCTGCGTGGCAAGAACGTGGTAACCACTGCCGGCACCACCAATGAGCGCTACCT GAAGAGCTATAACGTCGACCACAAGATCGACATGTTCGTGATTAGCGCCAAGGATCACGGCGAAGCGTTCCAGATGTTGCAAACGGGACGGGCGGCGGCG TTTTATATGGACGATGCGCTGCTCTACGGCGAACGCGCCAAGGCCCACGACCCGCATAAGTGGGTGGTGGTCGGGGAAGAGCAGTCGCGGGAAATCTACA GCTGCGTGGTGCGCAAGGACGATCCGCAATTCATTGCGCTGGTTAACAGCGCGCTGGGTGATCTTTACAGTTCAGGGGAAATCAACGGTATCTACAAACG CTGGTTTGAACAGCCGATCCCGCCAAAGGGCTTGAACCTTGAGTTCCCGATGACCAGTGAACTCAAGGCGATCATTGCCAAGCCAGTGAGTGATCCGGTG CAATAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCCTCTGGGCTGTCTGGCAACGGCGGCCTAAAAATCGCCCCAAAGCTGCTGGGCAACCGCAAGGGCAACTACCGGCGCCGTTTCGGTTCGCAACACCCGC GGGCCGAGGCGGGCGGCGTGGAAGCGGTTGGCCTTGGCCAGCTCGACTTCGGCATCGGACAAACCTCCCTCAGGACCGATCAGGAAGGCCAGGCTTGAAG GCTTGGCATGACTCACCAATGGCTCGGCCACCGGATGCAGCACCAACTTCAACTCAGCTTCAGTCTGTTTCAACCAATCCGCCAACAGCACCGGCGGATG AATCACTGGCACCCGTGAACGCCCGCATTGCTCGCACGCGCTGATCGCCACCTGGCGCCAGTGCAGCAGGCGTTTGTCGGCACGCTCGTCCTTGAGCCGG ACTTCACAGCGGTCGCTGAAAATCGGTGTGATTTCGGTGACGCCCAGTTCGGTGGCTTTCTGAATCGCCCAGTCCATGCGCTCGCCACGGGACAGGCCCT
Amino Acid Sequence
>ABC transporter
MQKKITLLGCTLGLLMGSQVQATEPPLSGTLGKIASTKSITLGYRDASVPFSYVGDHTGKPMGYSVDLAGKIVERIQQQLALPDLNVQYNLVTSQTRIPL VQNGTVDLECGSTGVTAERQKQVAFSYGFIYVKGQLLTARDSGIKSFADLRGKNVVTTAGTTNERYLKSYNVDHKIDMFVISAKDHGEAFQMLQTGRAAA FYMDDALLYGERAKAHDPHKWVVVGEEQSREIYSCVVRKDDPQFIALVNSALGDLYSSGEINGIYKRWFEQPIPPKGLNLEFPMTSELKAIIAKPVSDPV Q
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site