Pseudomonas fluorescens C2, NL64_RS06655

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain C2 contig_8, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCAGATCGCGCCTCCGCGCACGCTCTACGAAGAGCCGAAAAACACCTTTGTCGCCAACTTCATCGGCGAGAACAACCGTCTTAATGGCCGTCTGCACAGC CAGACCGGCGACCGCTGCGTGGTCGAACTGGGCCGTGGTGAAAAAGTTGAAGCGCTGGCGGTGAATGTCGGCAAGACCGGCGAGCCCGTCACCCTGTCGA TTCGTCCGGAACGCGTGAGCCTCAATGGCTCCAGCGAGTCCTGCGTCAACCGCTTCTCGGGAAGGGTGGCGGAATTCATCTATCTGGGCGACCACGTCCG GGTTCGCCTGGAAGTCTGTGGCAAGACCGACTTCTTCGTGAAACAACCGATTGCCGAACTCGATCCCGGGCTGGCGGTGGGTGACGTGGTACCGCTTGGC TGGCAGGTCGAACACGTTCGCGCGCTCGACCCACTTCTAGAGGCGCATTGATCGCCCCCTGCTTCAACAACACCAACCCTGCACGTGGAGAGAACAATAA
DNA Sequence for Gene
>NL64_RS06655
ATGTTGAGATCCCTGAAATTCACCGCTCTGGCACTGGGCATGATGGGGGCGGCCAGCGCAATGGCGGCTGGCCCGGACCTGACCGTCGTGTCCTTTGGCG GCGCGAACAAGGCCGCGCAGGTCAAAGCCTTCTACGCACCGTGGGAAGCGGCAGGCAACGGCAAGATCGTGGCGGGCGAGTACAACGGTGAAATGGCCAA GGTCAAAGCCATGGTCGACACCAAGAGCGTGTCCTGGGACCTGGTGGAAGTTGAATCGCCAGAACTGTCCCGCGGTTGCGACGAAGACATGTTCGAGCAA CTCGACCCAGCCCTTTTCGGCAAGAACGAAGACTACGTCAAAGGCGCTATCCAGCCGTGCGGCGTGGGCTTCTTCGTGTGGTCAACCGTGTTGGCCTACA ACGCCGACAAGCTGAAAACCGCACCGACCAGTTGGAAGGATTTCTGGGACACCAAGCAATTCCCGGGCAAGCGTGGCCTGCGTAAAGGCGCCAAGTACAC CCTGGAATTCGCCTTGATGGCCGACGGCGTTGCGCCGAAAGACGTTTACAAAGTGCTGGCCAGCAAAGATGGTCAGGACCGCGCGTTCAAGAAACTCGAC GAACTCAAGCCAAGCATCCAGTGGTGGGAAGCTGGCGCACAACCACCGCAATACCTCGCTTCCGGTGACGTGGTCATGAGCTCGGCCTACAACGGCCGTA TCGCTGCGGTGCAGAAAGAAAGCAACCTGAAAGTAGTGTGGAACGGCGGCATCTACGACTTCGACGCATGGGCGATTCCAAAAGGCCTGGACCCCAAGCG CGCCGAAGCGGCGAAGAAATTCATCGCCTTCTCGGTACAGCCACAGCAACAGAAGACTTACTCGGAAAACATCGCCTACGGCCCGGCCAACACCCAAGCC GTACCGTTGCTGGCCAAGGATGTCCTGAAAGACATGCCGACCACCCCGGAAAACATCGCCAACCAGGTGCAGATCGACGTCAGCTTCTGGGCTGACAACG GCGAGCAATTGGAACAGCGCTTCAATTCCTGGGCTGCGAAATAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCAAGCCTTCAATTGAAGGCGGACTTTGTGGCGAGGGAGCTTGCTCCCGCTTGAGTGCGAAGCACTCACAAAATTGGCATTGCCAACATAATTTTGGGGC CGCTTCGCAGCCCAGCGCGAGCAAGCTCGCTCGCCACAGGTTTCCGCTCCCGCACGTTGCGGTGTTTCAACACAACAGAGGCGGTACGCCGCCCTCTGTA ACGATCAAAGATTTCCGGAGTACGCCATGGCTATCGCCGTTCCCGTGACCACGGGCACTGACCCCACCTTGAAGCAGCGGCTCAAGCACGCCGAGCGGGT CAACCGCTGGAAAGCCCAGGCCTTGATCGCGCCATTGGTGCTGTTCCTGCTGCTGGTGTTCCTGGTGCCGATCGCGGCGCTGCTCTACAAAAGCGTGGGT AACCCGGAAGTGGTCGGCGGCATGCCGCGCACCGTGTCCGCCATCGCCAGTTGGGACGGCCGCGGCCTGCCCGCTGAACCGGTTTACAAGGCTGCCAGCG
Amino Acid Sequence
>spermidine/putrescine ABC transporter substrate-binding protein
MLRSLKFTALALGMMGAASAMAAGPDLTVVSFGGANKAAQVKAFYAPWEAAGNGKIVAGEYNGEMAKVKAMVDTKSVSWDLVEVESPELSRGCDEDMFEQ LDPALFGKNEDYVKGAIQPCGVGFFVWSTVLAYNADKLKTAPTSWKDFWDTKQFPGKRGLRKGAKYTLEFALMADGVAPKDVYKVLASKDGQDRAFKKLD ELKPSIQWWEAGAQPPQYLASGDVVMSSAYNGRIAAVQKESNLKVVWNGGIYDFDAWAIPKGLDPKRAEAAKKFIAFSVQPQQQKTYSENIAYGPANTQA VPLLAKDVLKDMPTTPENIANQVQIDVSFWADNGEQLEQRFNSWAAK
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site