Pseudomonas fluorescens C2, NL64_RS05370
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain C2 contig_6, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CTACAAGACTGGCAAGGCTTACTGATAGTTTGCTTGTGTGAATCGAAAACCCCGACTTGTTCGGGGTTTTTTTTGGCCTTCTTGATGGAGGTCCGGGCTC TCGAAAGAACGTGCACCGCAACAGCAACCGAGCGGACCTGCGAGCCGAGCTATCCCCCTGTTATACGCACTCCCCTGTAGGAGCTGCCGAAGGCTGCGAT CTTTTGACTTTGATTCTTGAAAGCAAGATCAAAAGATCGCAGCCTGCGGCAGCTCTTACAGGTTTTTTGCTGTCTGTGCTATCTGGCTTCCATGAAGAAA GCTAACCCCAATGCCGGCCGATTAGTCGTGCTCCAGACAAAGTGTTTCCAGCAGGAAATACTTTTTTCATTGTCGGACAGATCTCTCTGCGCAATTAATG CCGCTCAACAGGCTTTGGCAAAGGAGTGCCAAGGATTCAATAATGGGGGTAATTCGAATTCCCCCTGTTGATATTTCGCTGGCAATAGGGAGTTTTGCTG
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| DNA Sequence for Gene |
>NL64_RS05370
ATGGATGTACCGGTTAATGCAAAACGGGAAGGGAAATCAAGTCGATGGTTGGGCCTAAGCATACTGATGCTGCCTGTATTGCTGGTAACAATTGACAATA CGGTACTTGGATTCGCGCTACCCAAAATCGCGGAGGCCCTGCGCCCGACTGCCAGCCAGCAACTGTGGATGATCGATGCTTATTCGCTGGTATTGGCGGG ATTGCTGGTGTCGATGGGTAGTTTGGGAGATCGAATCGGTCATCGTAAGTTATTGCTGGCTGGGTCGTTGGGTTTTGCGATTGTGTCGGTGCTAACCGCG TATTCCAATACCGCCACGCAACTGATTGCCGGGCGAGCTTGTATGGGTGTTTTCGGTGCAATGTTGATGCCCTCGACTTTGGCATTGATACGTTCGGTGT TCGAGGATCGAGAAGAGCGGAGATTAGCGGTCGCGATATGGGCTACTACATTGACGGTAGGATCGGCACTCGGTCCTGTAGTCGGTGGGGTATTGCTGGA GTTCTTCAGTTGGGGGGCGATTTTCCTCTTGGCGGTGCCCGTGTTGGTGCCACTGCTGGTATTGGGGCCACTGTTGTTGCCCGAATCCGAGCGAGATGCT TCAGGGGCTTTTGATCCGATAAGCATCCTGCAATCGATGGTGGCTCTTGGTGCCATTGTTTATGGCATTAAACACAGCGCCAGTAATGGTATCGACTGGA TGGCGCTGACAGCATTTGCAGTAGGCACGGTTGCGGGCTGGATGTTTGTACGTCGGCAGTTACGACTGTCGGTGCCGCTGATGGATCTGAGTCTGTTCCG CAGTGGCACTTTTAGCGGATCGGTCCTGATCAATTTGATGAGTCTCGCGTTTCTCGTCGGCTTCGTATTTTTTACCACTCAGTTCCTGCAGATCGTTCTT AAGATGTCGCCGTTGAGTGCCAGCCTCGCGTTGGTGCCAGGTCAGATCATGGCGATTGTAGTGGGGATGGCGGTCGTACCTGTCGCTCAGCGATTACAGG TGCATGTTCTGATTCCGATTTTGTTGGCGTTTGCTGGAGCGGCGTTTTTGCTCGTCGCCAGCATGGGCAGTAGCCTGATCGTTCTGGTGGTGGCTTTTGC CTTGCTGAATATTGGCGTGGGCGCGATCGCGACGGTGTCCAATGATGTGATTTTGTCAGCCGCGCCACCGGCTAAGGCGGGTGCCGCGTCGGCCATTAGC GAAACGGCCTATGAAGTGGGCGTAGTTTTGGGGACGACAGTGCTCGGTGGCGTCGTTACCGCCTACTATCGCGGCGCATTGCAGCTTCCGGGGTTCCTGA GCGAAGTGCAGATGATGCTGGCGAGCGAGACGCTGTCTGGCGCCTATCATGTGGCGGCAGACTTGTCGGGTGATCAAGCAAGTGAGTTGATGGCGCAGGC GGGAAGGGCATTTGAAGGTGGAATCGGTTTGGTTTCGTGGGTGACGTTCGGTTTGGCGGTTATTGCGATTCTGATTGCCTGGCGCACTCTGCGGACACCG AAAATGCAATCCGCAGAGGTCCATTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCGAAAGCTAGAATTGGGTCGCGCATCTTACAGTCCGAGCTTTTCAGCACAATGCTTGCTCAGCGGCCGTCCGCAGGTATGCTGTTGGCCTGCCGAGGAG ATTGAAAATGGCCTACGATTTTGACCTTTATGTGATTGGTGCCGGTTCTGGTGGTGTGCGCGCTGCACGATTTTCGGCCGGTTTCGGCGCGAAGGTGGCG GTGGCCGAGAGCCGCTACCTGGGTGGTACTTGCGTGAACGTTGGCTGTGTGCCGAAAAAGTTGCTGGTCTACGGTGCGCACTTTGCCGAAGACTTTGAGC AGGCTTCCGGTTTTGGCTGGAGTCTGGACGAAGCGCAGTTCGATTGGGCGACGCTGATCGCCAACAAGGACCGCGAGATCAATCGCCTGAACGGTATTTA CCGCAACCTGCTGGTCAACAGCGGCGTGACCTTGCATGAAGGGCACGCCAAGATCGTCGACCCGCATACCGTCGAGATCAATGGCGAGCGCCACACTGCC
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| Amino Acid Sequence |
>MFS transporter
MDVPVNAKREGKSSRWLGLSILMLPVLLVTIDNTVLGFALPKIAEALRPTASQQLWMIDAYSLVLAGLLVSMGSLGDRIGHRKLLLAGSLGFAIVSVLTA YSNTATQLIAGRACMGVFGAMLMPSTLALIRSVFEDREERRLAVAIWATTLTVGSALGPVVGGVLLEFFSWGAIFLLAVPVLVPLLVLGPLLLPESERDA SGAFDPISILQSMVALGAIVYGIKHSASNGIDWMALTAFAVGTVAGWMFVRRQLRLSVPLMDLSLFRSGTFSGSVLINLMSLAFLVGFVFFTTQFLQIVL KMSPLSASLALVPGQIMAIVVGMAVVPVAQRLQVHVLIPILLAFAGAAFLLVASMGSSLIVLVVAFALLNIGVGAIATVSNDVILSAAPPAKAGAASAIS ETAYEVGVVLGTTVLGGVVTAYYRGALQLPGFLSEVQMMLASETLSGAYHVAADLSGDQASELMAQAGRAFEGGIGLVSWVTFGLAVIAILIAWRTLRTP KMQSAEVH
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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