Pseudomonas fluorescens C2, NL64_RS27750

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain C2 contig_42, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TGCAGGTTTTGCTCGGCGCTTAAAGGCTGACCCAGATCCCTTGTGTGTCTTCGCGACTGTCCACGCGGGTCAGCGATTGCCCCGCGCACGGGCCGGCCAC GCATTCGCCGTCCTCAATCAGAAACAGTGCGCCATGGGTGGCGCACTGGATCAGGCTGTTGCTGGGGTCCAGGAACTGGTCAGGGGTCCATTCCAGCCCG ACGCCGCGGTGCGGGCAGCGGTTGATATAGACATAGACCTGGCCATCCCGGCGCACGGCAAAGAGCTTTTGGCCGTCGATGTCGAACCCGCGGCTGCTGC CATCGACCAGCGCTTGGCCTGGGCAAAGAAACTTCATGTCTGTCCTCAAATCTCGAAGTGCGTCGTAGGAAATGTCTCTACTTGACGCTTAAATGCAAAC AATTATCAAATGGCCTTCCACCCAACGGGTGCTTGCTGGATGCCGAGGATACTGGGCCTATCAGCCAGACGCCCGGGTAAATCGTTCAAGGAAGCTGTTT
DNA Sequence for Gene
>NL64_RS27750
ATGCGCCTGAGTGCTCGTGTCGCTGCGATCTGTACCGGACTCCTCGTCAGTCATTATGCCGCTGCGGCCGAGTTGCCCCAGCGTTGGGTAAGCGCCGGCG GTGCGCTTTCGGAGTGGGTTGTTGCGCTCGGCGGTGAGTCGAAACTGGTCGGAGTCGATACCACCAGTCAACATCCGGCCTCCCTCAAGGCATTGCCGAG TATCGGTTATCAGCGGCAACTGTCGGCAGAAGGCGTATTGAGTTTGCGCCCGCAAATTCTCGTCGGCACCGAAGAGATGGGGCCGCCGCCGGTGCTGTCG CAACTTCGCAGTGCAGGCGTGCAGGTTGAACTGTTCTCGGCCCAGCCGGACCTGCCGACGTTGCAAGGTAACCTGCAACATCTGGGCAAGCTGCTTGGTG CCGAAGATCGGGCAGCGCAGTTGCTGGGCGCTTACACACAGGAACTCGAACAGCAAAAGATCCGAGTGACTCGGGCGCAATTAACGCAACCGTCCCCGGG CGTGCTGTTGCTGCTCGGACATGCCGGCGGCAAGCCGCTGATCGCTGGCAAGGGCACCGCTGCTGATTGGTTACTGCAGCGGGCTGGTGGTCACAATCTG GCGACCCATACCGGGTATAAACCGTTTTCGAATGAATCCTTGGTAACCCTGGATCCTGCTGTGCTGGTATTTGCCGATCGTGCGCTGACCGGGGATGCAG CGCGTGAGGCCTTGTTCAAGGAAAACCCGATTCTGGCCTCTACTCGCGCTGCCAGGGACGGGCGGGTGATCGAGCTGGATCCGACCCTGCTGGTGGGTGG ATTGGGTCCGAGGTTGCCGGAAAGCTTGAACAAACTGACTTTGGGCTTCTTTCCCGACATGACGGGTCAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCATCCGTCCGCTTGGCGCCAAAAGGGGCGGGGCGGACGACTTTTCTTCAGGCAAAAAAAGACCCGGCAAGAGCCGGGTCAAATAACCGTGATTAGCCTG ATGAGGAGATAATCTGAGAGTCCGAACCAAGGGCTTTTCAGAAAATCGACCAGTCTCGCGACCAGTTGTGATAATCATATCGATTCTCATTACCAAGTCA ACCGCTGATTTTCCGTTTAATCGATTTGTGTCGCTCGTTTTCTGTAAGTATCTGAAATCGTTGAGTTCAGGTCTGTCGTTTTCAGTGCCGTTCAAATGAA TGCTTGGCAAGCAGTCCTCATTTTAATTCTTGTGACGTGAAGAAATAGCTTCCAGCTGTTTGTTCAGAGCCTCTTTGCGCTCGGCGGGAATGTCGTTCCA GTGCACGTCCATCAGTGCACCTTCGATCGCATACAACAACACCTTGGACGCCCGGAATCCGCGCGTGCGCACGGCCCGATAAGCGTCCACCGCCCCCAGG
Amino Acid Sequence
>ABC transporter substrate-binding protein
MRLSARVAAICTGLLVSHYAAAAELPQRWVSAGGALSEWVVALGGESKLVGVDTTSQHPASLKALPSIGYQRQLSAEGVLSLRPQILVGTEEMGPPPVLS QLRSAGVQVELFSAQPDLPTLQGNLQHLGKLLGAEDRAAQLLGAYTQELEQQKIRVTRAQLTQPSPGVLLLLGHAGGKPLIAGKGTAADWLLQRAGGHNL ATHTGYKPFSNESLVTLDPAVLVFADRALTGDAAREALFKENPILASTRAARDGRVIELDPTLLVGGLGPRLPESLNKLTLGFFPDMTGQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site