Pseudomonas fluorescens C2, NL64_RS26455

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain C2 contig_36, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TTTATTTGTAGCTAGTCTTAGATCTAAAGTGAGTGGTGGTTGGGCAGGGTGCCTGGCATAAGGAGGTGAATGAACAAGCTCATTGTCGCTTTAGCAAGAC TGACATTGGCGGGTTGTGGCACTAATGCCAGGACCCATGCGGTGCGTGGTGTCAGTGGTATTGAAATCGATTGTTCAGGAATTGGCTCTGGGTGGGAGAA GTGCCAGAAGCGAGCAGCCAAGGAATGTAAGGCGTCCGAGTACAAGGTTGTAGCAAGGTCTGATGATGCTAAAGATGAGGATGAATTTCCCTTTGGTTTC AACCCGGCAGGCTATCTGACGCGCACGATGCTGGTTATTTGTAGGTAAGAGATGAGTGTTGGCGAATGTCCTCCTGCGCCCTGGAGCAGGGCATTTCCTA AAGGGTGGAAGGATGTCAAAACTCGGACTGTTCAAAATCATCCGGGCGTGCTAAAACCTTTGAAGCGCTGATCTAGCTGCTTGAAAAAGAAGGGAAAAAT
DNA Sequence for Gene
>NL64_RS26455
ATGACGAAGTCGGAGTTGATCGAACGAATTGTCACCCATCAAGGGCTGCTCTCATCCAAGGATGTGGAGCTGGCCATCAAGACCATGCTCGAACAAATGT CCCAATGCCTGGCCACCGGTGATCGCATCGAGATTCGTGGGTTCGGCAGCTTCTCCTTGCACTACCGCGCACCGCGTGTTGGTCGCAATCCAAAAACCGG CCAGTCCGTCAGCCTCGACGGTAAGTTCGTACCGCACTTTAAGCCGGGTAAAGAATTGCGTGATCGTGTGAACGAGGATGAGGAGGAAGGGCTTTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CTATCGCCGATCATCAAGGTGTAGCTCATGCGTAATCTCAAGCGAGTGCTTCTTGGGGTCTTCGTGCTTGTACTGGTACTGGCGATTCTCGCGTTCGTTC TCGAAAATCAACAATCGGTTTCTCTGTCGTTTCTCGGTTGGGCCGGGCCGCAATTGCCAGTTTCTCTGGTGATGGTTCTCGCGCTATTGATCGGTATGGT GATCGGGCCGATACTTGGCTGGTTTCTGGGGCGCTCGTCCAGGGTTTCACGCAAGCGTCTTGTTTGATTGTGATTAAAGCGGGGCGCAAATTGAATTTGC ACCTAGGCTCGTCCGCATCCATTAGTAAAACTGTCATTAAGCTGTAAAATGCTGCGCTTATCCGATAACGGCATATTCCTGCATCGGTTCCGAATGACTG TCAGAAGTCACAGCTGACTTTATGGCGTTTGCATTCACGGATTGGACAGTGCTCGGTTGGCGGTCCTGTCAGTAACTAAAGGGTATGGTTTAGCGTGAAA
Amino Acid Sequence
>integration host factor subunit beta
MTKSELIERIVTHQGLLSSKDVELAIKTMLEQMSQCLATGDRIEIRGFGSFSLHYRAPRVGRNPKTGQSVSLDGKFVPHFKPGKELRDRVNEDEEEGL
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site