Pseudomonas fluorescens C2, NL64_RS25370
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain C2 contig_33, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TCGTCGAGTTGTTTGGCAGCGGCACCGAGCTTGCGGCCTTCGCTAACGGCGACGACCAGCGTGGCGGTCTTCAACGTTTCCGGGTTAACGCTTTTTACAA CCAGTTCCATGTCCGGGTCCCTGAATTGATGGTCATCACGCAAGCGCTCGACAAGTTAAAGGCGTCGCTTGCTTATAAATAGGAAGGCGCCAGTACCTGC CGGCGACAAAGGCCGCAGTTTGAACCTCGCCAGCGGCGCCTGACAACCCTCGGTTGTACGATTGTAGGAGCGAGCCTGCTCGCGAGAAACCTGAGGCCAC CGTGGGGTTTCAGACTTCCCGCGTTATCGTTGACGACCATCTCGAGCAAGCTTGCTCCTACACCCCCGCACCAATGCGCAGTGACAGGCGCACTCAATCA CAGGATAATGCGCCATCTTTTTCGGCGGCTCTGCCTTGCGGGCTGTCTGATGTGTTTGCTTGTTTGGCCGCCTTAGCCTGACAACCCTGGAGTGTCTGGT
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| DNA Sequence for Gene |
>NL64_RS25370
TTGATCGTCTTCCGTTATCTATCCCGCGAAGTCCTGTTGACCTTGAGCGCCGTCAGCGCCGTGCTGCTGGTCATCATCATGAGCGGGCGTTTCATCAAAT ACCTCGCCCAGGCGGCGTCGGGTCTGCTGGACCCGGGCTCGCTATTCCTGATCATGGGCTTCCGTCTGCCCGGTTTTCTTCAGCTGATCCTGCCGCTGGG GCTGTTTCTCGGGATCCTGCTGGCCTACGGTCGCTTGTACCTTGAAAGCGAAATGACTGTGCTGTCGGCCACCGGCATGAGCCAGCAACGCCTGTTCCGC ATGACCCTATTCCCGGCCACGCTGGTGGCACTGGTCGTGGCCTGGTTGAGCCTGAGCCTGGCACCACAAGGTGCCAATCAGTTTCAACTGCTGCTGAACA AGCAAGATGCCCTGACCGAGTTCGATACCCTGGAGCCCGGCCGCTTCCAGGCCCTGCGCGACGGAACACGGGTGACGTATACCGAACAGCTGTCGGATGA CCGTGTCAATCTGGGTGGCGTGTTCATCTCGCAAAAGAACGTCAATTCCGACAAGAAGGATCGCGGGATCTCCGTGCTGGTGGCCGAGAAGGGCCGTCAG GAAATCCGCCCTGACGGCAACCGCTACCTGATCCTCGACAATGGCTACCGCTACGACGGTAATCCCGGGCAAGCCGATTACCGCGCGATCAAGTACGAAG AATATGGCGTGTTGCTGCCAAAGCCTGATGTCAGCGACGAAGTGACCGACCGTGACGCGATGACCACCGCTTCCTTGCTGGGCAGTGACGACATCCGTTC CCGCACCGAGCTGCAATGGCGCCTGTCCTTGCCGTTGCTGGTGTTCATCGTCACCTTGATGGCGGTGCCGCTGTCACGGGTCAATCCGCGTCAGGGCCGT TTCCTCAAGCTGCTGCCGGCGATTCTCCTTTACATGGCTTACCTGACCATCCTGATTGCCGCTCGCGGCGCCCTGGAAAAGGGCAAGATCCCGCCGGCGT TGGGGTTGTGGTGGGTGCACGGGATCTTCCTGGTCATTGGCCTGGGCCTGCTCTATTGGGAACCTTTGCGCTTGAAGATGGCGAGTCGCCGTAGCGCGCA GGAGGTGGCCCGTGGTTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCTCGATCGCTACATTGGTAGCAGCGTATTCATGGCGATCCTGGCGGTACTGGGGATCATTCTCGGTCTGGCGACACTGTTCGCGTTCATCGACGAGATG AGCGAAGTCAGCGATACCTACACCTTGGTCGACGTGGCAAGTTACGTACTGCTGACCGCGCCGCGACGTCTGTACGACATGCTGCCGATGGCGGCATTGA TCGGTTGCCTGATCGGCCTCGGCAGCCTGGCCAGTAACAGCGAGCTGACCATCATGCGTGCGGCTGGCGTCTCGATCGGACGGATCGTCTGGGCCGTGAT GAAGCCGATGCTGATCCTGATGGTCGTTGGTGTCTTGATCGGTGAATACGTCGCGCCGGCCACCGAAGTGACTGCTCAGGCCAATCGTTCCCTGGCTCAG GGCGGGGGCGATGCACAAAGCGCCAAGCATGGTCTGTGGCACCGCCAGGGTGACGAGTTCATTCACGTCAACTCTGTCCAGCCTAATGGCCTGCTGTACG
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| Amino Acid Sequence |
>permease
MIVFRYLSREVLLTLSAVSAVLLVIIMSGRFIKYLAQAASGLLDPGSLFLIMGFRLPGFLQLILPLGLFLGILLAYGRLYLESEMTVLSATGMSQQRLFR MTLFPATLVALVVAWLSLSLAPQGANQFQLLLNKQDALTEFDTLEPGRFQALRDGTRVTYTEQLSDDRVNLGGVFISQKNVNSDKKDRGISVLVAEKGRQ EIRPDGNRYLILDNGYRYDGNPGQADYRAIKYEEYGVLLPKPDVSDEVTDRDAMTTASLLGSDDIRSRTELQWRLSLPLLVFIVTLMAVPLSRVNPRQGR FLKLLPAILLYMAYLTILIAARGALEKGKIPPALGLWWVHGIFLVIGLGLLYWEPLRLKMASRRSAQEVARG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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