Strain | Pseudomonas fluorescens strain C2 contig_33, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CAATGGCGAGGCGCTGTTCAGTGGCCTGTATCTCAATGAATTACTGATTCGCCTGCTGCCTGCCGAAGACCCGCATCCCGCCGTGTTCGATCACTACGCC GCGACCTTGCTGGCCCTGGCCGAAGGGCGTGCGCTGGAGCCACTGCTGCGTTCGTTCGAGTGGCGGCTGCTGGATGATCTGGGCTACGGCTTTTCCATGA ATACCGACATTCACGACGAGCCCATCGCACCTGACGGCCTCTATCGCTTGCAAGTGGACGCGGGGCTGGAGCGGGTTTACCTGCTGCAACCCGGCCTGTT CAACGGTACGGAATTACTGGCCATGGCCGATGCTGACTGGAGCGCTCCCGGTGCCTTGTCGGCGGCCAAGCGTTTGATGAGACAGGCGCTGGCCGTTCAT CTGGGCGGTCGGCCGCTGGTTTCCCGAGAGTTGTTTCGAAAGCCGTAAATTCCCCGTGTATGCTGTGCACCGAACTTTCTCTTCTTCTGGAGCGCTTTCC
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DNA Sequence for Gene |
>NL64_RS25335
GTGACCACCAGCACCCGTATTCTTCTTGGCGTGAACATCGACCACGTTGCCACCCTGCGTCAGGCCCGGGGCACTCGCTACCCGGATCCGGTCAAGGCAG CACTGGACGCGGAAGAGGCGGGCGCTGACGGCATCACCGTGCACCTGCGTGAAGACCGTCGGCACATCCAGGAACGCGATGTGCTGCTGCTCAAGGACGT GCTGCAAACCCGCATGAACTTCGAAATGGGCGTCACTGAAGAGATGATGCAGTTCGCCGAACGGATTCGTCCGGCGCATATTTGCCTGGTGCCGGAAACC CGTCAGGAGCTGACCACCGAAGGTGGCCTGGACGTGGCGGGGCAGGAAGCGCGGATCAAGGCCGCGGTGGAGCGCCTGTCGAAGATTGGCTCCGAAGTGT CGCTGTTCATTGACGCCGACGAGCGTCAGATCGAAGCGTCCCGTCGTGTCGGCGCCCCCGCCATCGAGTTGCACACTGGGCGTTATGCCGATGCCGAGAC GCCGACTGAAGTGGCGGAAGAACTCAAGCGCGTGGCTGATGGCGTGGCGTTTGGTTTGGCCCAGGGTCTGATCGTCAATGCAGGCCACGGTCTGCACTAT CACAACGTTGAGGCCGTGGCGGCGATCAAGGGCATCAACGAGCTGAATATTGGCCATGCACTGGTGGCTCATGCGTTGTTCGTCGGGTTCAAGTCGGCTG TTTCGGAGATGAAAGCGCTGATTCTGGCGGCGGCTTTGAAGGGTTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GATCAAAAGATCGCAGCCTTCGGCAGCTCCTACAGGGGATCGCATTCCAATGTAGGAGCTGCCGCAGGCTGCGATTCTTGCTTTAAAGCGGCGTTGATTC TGGCGGCGGCTTTGAAGGGTTAAGATCAAAAGATCGCAGCCTTCGGCAGCTCCTACAAGGTGAACACAAATCCCCTGTAGGAGCTGCCGAAGGCTGCGAT CTTTTGCTTTAAAGGGGAGCCGGTTCCTGCGCAGGCTTGCTCTTGTCGATCCCCGGCACGTGCAGGTTGCCCTCGGCGACCTGGTCGCCTTCAAGCTGCG GCTGCGTGACCCAGGTCAGGATGTCGTAGTAGCGGCGGATGTTCGCCACGAAATGCACTGGCTCGCCGCCACGGGCGTAGCCGTAACGGGTTTTGCTGTA CCACTTCTTCTCGGACAGACGCGGCAGCATTTTCTTCACGTCCAGCCACTTGTCCGGATTCAGCCCTTCCTTGGCCGCCAGTTTGCGCGCGTCGTCCAGG
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Amino Acid Sequence |
>pyridoxine 5'-phosphate synthase
MTTSTRILLGVNIDHVATLRQARGTRYPDPVKAALDAEEAGADGITVHLREDRRHIQERDVLLLKDVLQTRMNFEMGVTEEMMQFAERIRPAHICLVPET RQELTTEGGLDVAGQEARIKAAVERLSKIGSEVSLFIDADERQIEASRRVGAPAIELHTGRYADAETPTEVAEELKRVADGVAFGLAQGLIVNAGHGLHY HNVEAVAAIKGINELNIGHALVAHALFVGFKSAVSEMKALILAAALKG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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