Pseudomonas fluorescens C2, NL64_RS24975
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain C2 contig_33, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ATGTTTGGTGTTGTTATGACACTGTACTTTCGACTATCAATAAAAATTCTGAGCTATTTGGGTGCTATTAGTTACTCGACTTATTTGATACATCCCTTCT TTCTGGAATGGGCTGCGCATTGGGTGGACTTGAGTGCAGAGTTTAACGTTGGCGTTTTTTTGATTTACATCCTGGCGACGCTTACGCTATCGAGTATTAG TTATTCATTGATAGAGAAACCCTGTGTAAGTCTTGGGCGGAGACTCAATCTACGACTTCAGGCCGGTTTCGAGAATGAGTTGGAACTGAGACAAGAGCCC GCCGACGCGGAGGCCTCCGTTTCTGATGGAGGACGGCTGCCGCAGCTTCACAAGCGACTTTGATCCATTGGGCAAAAACACGGTGCCACAGCGGGGTCTG GGTTTTTTTTGCGAAGGAAAAGTAGTGCTCTGTGTCTTATAAATGAAACACCGCCCTCGGCTATACTCCCCGCATTTCGAAACAAGCCCGAGGATTGACT
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| DNA Sequence for Gene |
>NL64_RS24975
GTGAAGAACTGGACGTTGCGCCAACGCATTTTGGCGAGCTTTGCGGTAATCATCGCCATCATGCTGTTGATGGTGGTCGTCTCGTATTCCCGGCTGTTGA AGATCGAAACCAGCGAAGCCAGCATGCGCGACGACGCGCTCCCAGGCGTTTATTACAGCTCGATGATTCGCGGCGCGTGGTCCGACAGCTATCTACGAAT CCAGGAAATGCTCGGCCTGAAAGAAGGGCAGGGTTTCAGCGCCGAGGACGAGAACAACTTCAAGGCCTATGCCGCTCGCCTGCAAGAGCAGATCGGTCAT TACCGCGAGACCATCACGACGGACGAGGATAAGGTCGAATACTCAGCCTTCGACGAAATCCACAAAGAATACGACCGGATTCTGGCGACAGTTATCGACT TGCATAAACGCAACCAGGAAGTCGAAGCGATCAAGATGTTCAACGAACAACTGACGCCGACCTGGACCGAAGGCCGCAAGAAGATCAACGACATCCTGGT TCACAACAAATCAGTGGCCGACGCGGCAGTAGCCGCCATCGATGACGCCGTCGTCACCGCCAAAGTCATCATGGGCATTTCCCTGATATTTGCCGTACTC GCCGCCGGCCTCTGCGGCCTGCTGCTGATGCGCGCGATCATGGCGCCGATGAATCGCATCGTGCATATCCTCGAAGTCATGCGTACAGGCGACCTCAGCC GTCGCCTGAACCTGGAACGCAAGGACGAGTTCGGCGCCGTGGAAACCGGCTTTAACGACATGATGGCTGAGCTGACATCCCTGGTGTCCCAGGCCCAGCG TTCCTCGGTGCAGGTCACCACATCGGTCACCGAGATCGCCGCGACCTCCAAGCAACAGCAAGCCACCGCCACCGAAACGGCTGCCACCACTACGGAAATC GGCGCGACATCCCGCGAAATCGCGGCAACATCCCGTGATCTGGTGCGCACCATGACTGAAGTGTCCACCGCTGCCGATCAGGCTTCGGTGGCTGCCGGTT CCGGGCAGCAAGGCCTGGCGCGCATGGAAGAAACCATGCACTCGGTGATGGGCGCGGCCGATCTGGTCAACGCCAAACTGGCGATCCTCAACGAGAAGGC CGGCAACATCAACCAAGTGGTGGTGACCATCGTCAAGGTCGCTGACCAGACCAACCTGCTGTCGCTCAACGCCGCGATCGAAGCCGAGAAGGCCGGGGAG TACGGTCGCGGTTTTGCCGTGGTTGCCACTGAAGTACGACGCCTGGCGGACCAGACTGCCGTCGCCACCTACGACATCGAACAGATGGTGCGCGAGATTC AATCGGCGGTGTCGGCCGGTGTGATGGGCATGGACAAGTTTTCCGAAGAAGTGCGCCGGGGCATGTCCGAAGTGCAGCAGGTCGGCGAGCAGTTGTCGCA GATCATCCATCAGGTTCAGGCGCTGGCGCCGCGGGTATTGATGGTCAATGAAGGCATGCAGGCCCAGGCCACCGGCGCCGAACAGATCAACCACGCGCTG GTGCAATTGGGCGATGCCAGCAGCCAGACCGTGGAATCCCTGCGCCAGGCCAGTTTCGCCATCGACGAGCTAAGCCAGGTGGCCGTCGGGCTGCGCAGTG GCGTTTCGCGATTCAAAGTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TGAGCGAACTCACGGCCAAACGCACTGCGGTGAAGCAGGCGTTGCACGCGTTGTTTCTGGTGTTCCGCATCGGCAGCGAGCGTTATGCCTTGCAGGCCAT CGAAGTCGCGGAAGTGCTGCCGCGTGTGCCCCTGAAGCCGATTCCCCACGCGCCCGATTGGGTCGCCGGGGTTTTCGCCTATCGCGGTGCGGTGGTGCCA GTGATCGACCTGTGCGCGTTGACCTTTGGTACGCCTGCGCAAGCGCGTACCAGCACTCGGTTGGTACTCGTCCATTACCGTGCGGAGGAAAGTGCAGACG TGAAATTGCTCGGGTTGATTCTGGAGCAGGCCACCGACACCTTGCGCTGCAATCCGACGGATTTTAAGCCCTATGGCTTGGACAATCGTCAGGCGCCATA CCTCGGGCCTGTTCGTGAAGATGCCCAGGGCTTGCTGCAATGGGTGCGGGTCGCCGATCTGCTGGATGAGCGAGTTCGCGCACTGTTGTTTCCAACTCCG
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| Amino Acid Sequence |
>chemotaxis protein
MKNWTLRQRILASFAVIIAIMLLMVVVSYSRLLKIETSEASMRDDALPGVYYSSMIRGAWSDSYLRIQEMLGLKEGQGFSAEDENNFKAYAARLQEQIGH YRETITTDEDKVEYSAFDEIHKEYDRILATVIDLHKRNQEVEAIKMFNEQLTPTWTEGRKKINDILVHNKSVADAAVAAIDDAVVTAKVIMGISLIFAVL AAGLCGLLLMRAIMAPMNRIVHILEVMRTGDLSRRLNLERKDEFGAVETGFNDMMAELTSLVSQAQRSSVQVTTSVTEIAATSKQQQATATETAATTTEI GATSREIAATSRDLVRTMTEVSTAADQASVAAGSGQQGLARMEETMHSVMGAADLVNAKLAILNEKAGNINQVVVTIVKVADQTNLLSLNAAIEAEKAGE YGRGFAVVATEVRRLADQTAVATYDIEQMVREIQSAVSAGVMGMDKFSEEVRRGMSEVQQVGEQLSQIIHQVQALAPRVLMVNEGMQAQATGAEQINHAL VQLGDASSQTVESLRQASFAIDELSQVAVGLRSGVSRFKV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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