Pseudomonas fluorescens C2, NL64_RS03350

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain C2 contig_3, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CGATAATTATTGCTGAGGTCCAGTTCGATCTGCACTTCGGGGTATTGGCTCGAAAACTCCAGCAACAAACCATCGAAGAAGGTTTCCCCCAGCGAAACCG GAACCGTCATACGCACCGGGCCAGCCATGTCATCCTTCAATCGCGCCAGCGCCTGACGCGCCCTTTCGACCTGAACGACCAGGGCCTGCGCCTGTGGCAA CAAAGCAGCGCCCGCTGCCGTCAGGCTCAAACGCCGCGTGGTGCGTTGCAGAAGCACCACAGAAAACTGCGCTTCGAGCAGGCTGATGCGCTTGGACAAT TGCCCCTTGCTGCAACCCAGTTGTTGCGCCGCCAGGGTAAAACTCCCCGCCTCCACCAACACCGCGAACGCCGCCAGATCATCCATTTCGCTCATGGATT GTTTCCATTTGAAAACCAAAGGTTGCCTATTAGCGCGCTTATCGACGGAAAAAACCACTCTAAACTGAAGCCACTTTCAACCCAATGGAGTAACGGCAGC
DNA Sequence for Gene
>NL64_RS03350
ATGAAAATTCTTTTGATTGGCGCAGGCGGCACCATCGGTTCGGCGGTCGACAAGGAGCTTTCCCAGCGCCACGAAATCATCCGCATCAGCCGCAACAGCG GTGATTTTCAGGTGGACATCAGCGACAGCGCCTCGATTCGCAAACTGTTCGAGCAGACCGGTAAATTCGATGCGCTGATCTGCGCCGCTGGCAACGTAAC CTTCGCACCGTTGGCGGAAATGACTGACGAAAGTTTCACCCTGGGTCTGAAGGACAAACTGATGGGCCAGGTCAATCTGCTGCTGATCGGCCGCGAATTC GCCAACGATGGTGCATCGTTCACCTTCACCACCGGCGTGCTCAGCCACGACCCGATCCGCAGCGGCGCCTCGGCAGCGCTGGTCAATGGGGCGCTGGACA GCTTCGTCCGCGCTGCCGCCATCGAACTGCCACGCGGCCTGCGGGTGAATTCGATCAGCCCGAACGTGCTGGTCGAAGCCATGGGCAAATACGCGCCGTA CTTCCGCGGCTTTAAACCGGTTCCTGCGGCGGATGTGGCATTGGCCTACGCCAAAAGTGTCGAAGGCTTGCAGACCGGCCAGACATTCCACGTCGGTTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ACCACCACTAACCCGTAGGAACCGGCTTGCTGGCGATGGCGCCCTCCAGATCGCTATCGCCAGCAAGCCGGCTCCTACGGGTTAATCGACAACCATCACT GGGGTTGTGATGAACGTTCAGGCTGAGTAACGTGGCGGCACTTGTCAGGAGACCCCAAGATGCGTGTTGCCCGTTCCCTAGTCCTCGTTGCCCTGCTTCC GCTGTTCGCCGCTTGCCAGTTGTTCGATGGCTCGCGTGAAAGTGCCTCCCATGTGGGCCAAACCCGCATGCAGGGCCAATTGAGCGCAGCCGACGGCAAG CTGTTGTTCCAGCCATGCGGCGACACGCGTCGTTATGTGGTCAACGACACCGGCGGCACCAGCGTCCTGCAACAGGCAGCCACTCTGGCCGATGCCCAAG GCAAGTTGTTTGCCGATGTGCGCGGGCGGATCGTTGGCGACGGCCAACTTGACCTGGAAACCCTCTACCGCGTCGAACGTTCGGGCACCGCATGTGACGA
Amino Acid Sequence
>short-chain dehydrogenase
MKILLIGAGGTIGSAVDKELSQRHEIIRISRNSGDFQVDISDSASIRKLFEQTGKFDALICAAGNVTFAPLAEMTDESFTLGLKDKLMGQVNLLLIGREF ANDGASFTFTTGVLSHDPIRSGASAALVNGALDSFVRAAAIELPRGLRVNSISPNVLVEAMGKYAPYFRGFKPVPAADVALAYAKSVEGLQTGQTFHVG
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site