Pseudomonas fluorescens C2, NL64_RS22485

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain C2 contig_29, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CGTCGGCAGGGTGCTGCCGCGCTGGTTGAGGATTTCCTGCAACTGGAAACCGCTGGTCTCCGGCATGCGCACGTCGAGCACCAGGCAGGCGGGCTGCTTG GGGTCGTATTGGCTGAGGAACTCTTCGGCGCCGGCAAAGCACTGCGCCTGCACGCTGACGGACTCGAGCAACCAGGCCAGCGAAGTGCGCAGGTCTTTGT CGTCGTCAACGATGTAAACAATCGGTTTGCGGGTTTCCATCAGGGCTGCCACGAGAATTTCTAATTGTTGTTATCGCACGCAAGCACGCGCGGCGGACAT CGGCTCATCTTTTTCGAGCCAGTGTGCAGAATACCCACTGCAACGGGCCGTGACGATAAAGAAACCACCTAGTCGACTAGCGGAAAGCCAACCTTTGCAT GGGGATCGTCAGAATGGTTGCGCGCAACGTCGCGCCTTAGTCTTGTTCCATCACCTACGGGCCGCAGCAAAGCGGTCCTCCTGAAGGAAGGGGCATCGAC
DNA Sequence for Gene
>NL64_RS22485
ATGGCCGACCTGAGCCAGCAGCAAATCGACTTTCGCAACGCCATGGCGCAGCTGCCTGCTGCGGTGAACATCATCACCACCAACGGCCCAGGCGGACGTT GCGGCATCACCGCCAGCGCCGTGTGCTCGGTGACCGACTCGCCGCCCACCGTGCTGGTCTGCGTCAACCGCAACAGCGCCACCCACGACGTGTTCCGCAC CAACGGCCATCTGTGCGTCAACGTGCTGTGTGGCGAGCAGGAAGAACTCGCCCGCCACTTCGCCGGCATGACCAAAGTGCCGATGGCCGAGCGATTTGCC TGGGACCTGTGGGACGACGGCGCCGCCGATGTGCCGGTGCTGCGCGATGCCCTGGTGCAGCTGGAGGGGCGGATCACCGAGTGCAAGGAAGTGGGTTCGC ATTCGGTGATGTTTGTCGAACTGACAAAAGTGGGCGTGCGCGAACCGCGTGACAGCCTGGTGTATTTCAACCGGTTGTTTCATCGCCTGGAACATGCCGG GGCGCATTGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TAACCCTGCTTTTGTAGGCGCTGCCGCAGGCTGCGATCTTTTGATCTTTGCTCTTTAAAAGCAAGATCAAAAGATCGTCCGAACGCGGCCCGAGCCTGCG GCAGCTCCTACAGGTCGCGGGTGTGTTGTGGGTGCCTTGTGGCGAGGGAGCTTGCTCCCGCTTCATTGCGCAGCAGTGGCAAAACAGGGGGCCGCTTCGC AGCCCAGCGGGAGCAAGCTCCCTCGCCACAAATGCGTCGTTTCTGTCGTAAGTATTCCTGAGCCAACCTGCACGCCCGCTCAACATCGGCACCATTTCTA TCGCCTTCGGCGGGTATGAATCCAGCGCCAGCGTCCCGCGATCCGCCGTCGTCATCGGCTCAACCGCGTCGTATCTGCCCTCATCGCCAGCAGGCCGGCT CCCACAAGGGTTCTGCGGTGAACACAAGATTTGTGCCTCGCAAAAATCCACTGTAGGAGCGAGCCTGCTCGCGATGGCGGAGTATCAGGCGCCGATGATG
Amino Acid Sequence
>MFS transporter
MADLSQQQIDFRNAMAQLPAAVNIITTNGPGGRCGITASAVCSVTDSPPTVLVCVNRNSATHDVFRTNGHLCVNVLCGEQEELARHFAGMTKVPMAERFA WDLWDDGAADVPVLRDALVQLEGRITECKEVGSHSVMFVELTKVGVREPRDSLVYFNRLFHRLEHAGAHC
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site