Pseudomonas fluorescens C2, NL64_RS20730 (ampC)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain C2 contig_27, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ATATCTCCCTGGCGATGTTCACCCACGTCGCGGCGGCCGCACCGGGTGAAATCACCGCCATCGACACCCACTGGATCTGGCAGGACGGCCAGCGCCTGAC CAAGGCACCGCTGCAAATCGTCGACGGCTGTGTGCGAGTGCCGCAGAAAGCGGGGCTGGGTATCGAACTGGACATGGATCAAGTGGCCAAGGCGCATGAA CTGTACAAAGGCATGGGGCTGGGCGCGCGGGATGACAGCGTGGCGATGCAGTTTTTGATCCCGGGGTGGAAGTTCGATAACAAGCGTCCGTGCCTGGTGC GCGAATAATCCGGAAGACACCGCAATCCCCCTGTGGGAGCGAGCCTGCTCGCGATGACGGCAGCACATCCGGCAAAAAGGGTGGCTGACACACAGCATCG CGAGCGGGCTCGCTCCCACAGGTGTTTCTGCCCTCGTTATTTGTCGATCACCGTCGGATTGTCTACATTTGGCACCTTTAAAAATGCTGGGACACTGCCA
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| DNA Sequence for Gene |
>NL64_RS20730
|ampC
ATGACCGACAACATCACACTCACCCGCCTCAAGCGCCTTGCGGTGTGCGTAGCGATATTCGCCACAGGCCAGAGTGCTGCGCAGGAGCCGATTGAGGCGC TTGTGAACGACGCCGTGCGACCAGTCATGCAAGCACAAGGCATCCCCGGCCTGGCGGTGGCCGTGACCATCGATGGCAAGCAGCACTACTTCAACTACGG CGTGGCATCGAAAGAAACCCCACAACCGGTCACCGAAAACACGCTGTTCGAAATCGGCTCGCTGAGCAAAACCTTCACCGCCACCCTCGCCGGCTACGCC GTGGCCAGCGGCAAACTGTCCCTGTCGGACACGGCCAGCCAAGTCCTGCCGGAACTGCGTGGCAGCGCATTCGACAGCATCAACGTATTGCAACTGGGCA CGTACAGCGCCGGTGGCCTGCCGCTGCAATTCCCTGAAAGTGCCGATGCGCCGGACAAGATGCTCGGTTATTTCCAACAGTGGAAACCGGTCTATGCCGC CGGGACCCATCGACAATATTCGAACCCCAGCTTGGGATTGTTCGGCTATCTGGCCGCCAAGAGCATGGGCGCGCCGTTTGATGAGGTGATGGAAAAGACC CTGCTGCCAAAACTCGGGCTGAAACACACGTTCCTGAAAGTGCCGCAGGATCAAATGGCGCTGTATGCCCAGGGCTATAACAAGGATGACAAACCGGTGC GGGTCGGGCCGGGAGCGCTGGATTCAGAGGCTTATGGGGTGAAAACCAGCGCCGCGGATATGATTCGCTACGTCGAGGCGAACATGAAACCGGCGCAGCT GGAAAAACCCTTGCAGCAAGCCATTGCCATCACTCACACGGGTTATTACACCGTGGGCAACATGACCCAGGGCCTGGGTTGGGAGTTCTACAACTACCCG GTCACCCTCGATCAATTGCTCGCCGGCAACTCGTCGCAGATGGTCATGGAGGCTCATAAAGTAAAGTGGCTGAGCCCGCCAAGACCTCAAACGGAAAACG TGCTGGTCAATAAAACCGGCTCTACGGGTGGTTTCGGTGCCTATGTGGCGTACGTGCCATCGCGAGACATCGGTATCGTGATCCTGGCCAACAAAAACTA CCCGATTGCGGAGCGGGTCAAAATCGCTCACACAATATTGAGCGCCCTGCCCCAATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AACTCACCCGTGACTTGTGGCGAGGGAGCTTGCTCCCGTTGGGCTGCGAAGCGGCCCTAATCCGGTGAAGATGCCAGTAGCAGATGGCGACTGCTGCGCA GCCGAGCGGGAGCAAGCTCCCTCGCCACAAAGGAACTCACTAGAGAGATTCCGTGTTCAATCAATCATCCGGCATTTCCGGCGGTTTGACGGGTTTGCCC GGTTTTGCAGGTTTCGTACCTTTGGCGCCCTTGGCGGCCGGTTCGGCTGTCGCGGCGGGTACGACCGTTGGCGGCGGCGCTTCTTTCTCGGCTGCCGGCA GTTGATCGACAGCGGCGAACACTTCTTTCAGCTCGATGGGCCCTGACTGCTCAAGTTTCTTTTCGCCGTCCTTGCCCACCAGAATCACTTTGCTCTTCGA CCCCGCCCCCAACTTCAGCGAGCGGATCAATGCCGCCGTGTCTTGCGGCCCCAGGTCTTTGCCCTCACGCTGGCCCATCAGGTTGAGCACGGTGTACAGC
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| Amino Acid Sequence |
>beta-lactamase/D-alanine carboxypeptidase
MTDNITLTRLKRLAVCVAIFATGQSAAQEPIEALVNDAVRPVMQAQGIPGLAVAVTIDGKQHYFNYGVASKETPQPVTENTLFEIGSLSKTFTATLAGYA VASGKLSLSDTASQVLPELRGSAFDSINVLQLGTYSAGGLPLQFPESADAPDKMLGYFQQWKPVYAAGTHRQYSNPSLGLFGYLAAKSMGAPFDEVMEKT LLPKLGLKHTFLKVPQDQMALYAQGYNKDDKPVRVGPGALDSEAYGVKTSAADMIRYVEANMKPAQLEKPLQQAIAITHTGYYTVGNMTQGLGWEFYNYP VTLDQLLAGNSSQMVMEAHKVKWLSPPRPQTENVLVNKTGSTGGFGAYVAYVPSRDIGIVILANKNYPIAERVKIAHTILSALPQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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