Pseudomonas aeruginosa PA7, PSPA7_1106 (mrdA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Sequence Data

Strain Pseudomonas aeruginosa PA7 chromosome, complete genome. [Details]
DNA Sequence Upstream of Gene
GCCGGAAGAGTGACGCCGGCATGCGGTTGCGCCTGATCGCGGTTGGCTCGCGCATGCCTCGCTGGGTCGAGGAAGGCTGGCAGGAGTACGTCAAGCGCCT GCCGGCCGAGCTGTCCCTCGAACTGGTGGAGATCCCGCTCAACACCCGCGGCAAGAACGCCGACGTGGCGCGCCTGATCCGTCAGGAAGGCGAGGCCATG CTGGCGCGCGTGCAGCCGGGGGAACGGGTGGTGACCCTGGAGGTCGAAGGGCGGCCCTGGAGCACCGAGCAACTGGCCCGCGAGCTGGACCGCTGGCGCC TCGATGCGCGTACCGTGAACCTCATGGTCGGCGGCCCGGAAGGGCTGGCGCCGGAGGTCTGCGCGCGCAGCGAGCAGCGCTGGTCGCTGTCGCCGTTGAC GCTGCCGCACCCGCTGGTGCGGATCCTGGTCGGCGAGCAGATCTACCGGGCCTGGACCGTATTGTCCGGGCACCCCTACCACAAATAGTCCCCAGTCCCG
DNA Sequence for Gene
>PSPA7_1106 |mrdA
ATGCCGCAGCCGATCCACCTGAAAGACCACGAGAAAGACGCCCGCCTGGTGCGTCGGCGTGTCATCGTCGGGGCGGTGGCGGTGGTCCTGCTGACCCTGG TGCTGGTGGCGCGCATGTACCACCTGCAGGTGACCCAGTACGAGTACCACTCGACGCTGTCGGAGAACAACCGGGTCCACGTGCAGCCGATCCCGCCGAC CCGCGGGATCATCTTCGATCGCAACGGGGTGATCATCGCCGACAACCGGCCGAGCTTCAGCCTGACCATCACCCGCGAGCGCACCGAGGACCTGCAGAAG ACCCTCGACACGCTGGTGGAGATCCTCGGCCTGAGCGAGGACGACCGGGCCATCTTCGAGAAGCGCATGAAACAGGGGCGGCGTCCGTTCGAGCCGGTTC CCATCATGTTCGAGCTCAACGAGGAGCAGATCGCCCGCATCGCGGTGAACCAGTTCCGCCTGCCGGGCGTCGACGTGGCGACCCAGTTCGTCCGCCATTA CCCGCTCAAGGAGCACTTCGCCCATTCGGTCGGCTACGTCGGGCGGATCAACGAGCAGGAACTGAAGAACCTCGACCCGATCAACTACAGCGGCACCCAC CATATCGGCAAGACCGGCATCGAGCGCTTCTACGAGAGCGAGCTGCACGGCACCGTCGGCTACGAGGAGGTCGAGACCAACGCCCGCGGGCGGGTGCTGC GGGTACTCAAGCGCACCGATCCGATTCCCGGCAAGGACATCGTCCTGAGCATCGACAGCCGCCTGCAGGAGGCTGCCGAGAACGCCCTGGCCGGCCGTCG CGGGGCCATCGTGGCGATCCAGCCGTCCACCGGCGACGTGCTGGCGATGGTCAGCCAGCCGAGCTACGACCCCAACCTGTTCGTCACCGGCATCAGCTTC AAGGCCTACGCCGAGCTGCGCGACTCCATCGACCGGCCGCTGTACAACCGCGTCCTGCGCGGGCTCTATCCGCCGGGCTCGACGGTGAAGCCGGCGGTGG CGCTGGCCGGCCTCGACGCCGGCGTGGTCACGCCGACTTCGCGGGTGTTCGACCCCGGCTATTACCAGTTGCCCAACTACGACCACAAGTACCGTAACTG GAACCGCTACGGCGATGGCTGGGTGAGCCTGGAGTCGGCGATCTACCGGTCCAACGACACCTACTTCTACGACCTCGCGCACAAACTGGGGATCGACCGT CTGCATGCCTTCATGAGCCGTTTCGGCTTCGGCCAGAAGGTCGCCCTGGACATGTTCGGCGAGGCCGACGGGCTGATGCCCTCGCGCGAATGGAAGCGCA AGACCCGGCGCCAGGCCTGGTACCCGGGCGAGACCCTGATCCTCGGCATCGGCCAGGGCTACATGCAGGCGACGCCGATCCAGCTGGCGCAGATGACCGC GCTGCTGGCCAACAAGGGCCACTGGATCCGCCCGCACCTGGCCAAGACCATCGACGGCCAGCCGCCGCTCGACCCCAACCCGATGCCCGACATCGTGCTG CGCGACCCGGCCAACTGGGACCGCGTCGACTACGGCATGCAGCAGGTGGTGCATGGCGCCCGCGGCACGGCGCGCAAGGTCGGCGCCACCTCGGTCTATC CGATCGCCGGCAAGAGCGGTACCGCCCAGGTGGTGGCGATCAAGCAGAACGAGCGCTACGACCGCTCCAAGCTGCTCGAGCGACATCGCGACCATGCCCT GTTCGTCGGCTTCGCGCCGGCCAACAACCCGCAGATCGCGGTGGCGGTGATGGTGGAGAACGGCGAGTCCGGCTCCGGCGTCGCCGCCCCGGTGGTCAAG CAGGTGATGGACGCCTGGCTGCTCGACGAGCACGGCAAGCTCAAGGCCGAATACGCCGAACCCGTGGCGCCGCTCGCGGCGGCGGTGGCCAGGCCCGAAC CCACGGCAGCCGAGCCGGAGGCGCCCGCCCTTGAACAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CTTCGACCGTACCCTGTCCAACGAAGACGTGATGCGCCGGCGCGCCAGCCTGCTGCAGCGCCTGCACATCGACGGCATCCTCCTGCTGCTGTTGCTGATC CTCGGCGCCACCGGCCTGTTCGTCCTCTATTCGGCGAGCGGCAAGAGCTGGGACATGCTGATGAAGCAGGCCACCTCGTTCGGCCTGGGCCTGGGCATGA TGGTGATCATCGCCCAGATCGAACCGCGCTTCATGGCCCGCTGGGTGCCGCTGGGCTACCTGGTGGGGGTCGCGCTGCTGGTGGTGGTCGACGTGATCGG CCACGACGCCAAGGGCGCGACGCGCTGGATCAACATCCCCGGGGTGATCCGCTTCCAGCCCTCGGAATTCATGAAGCTGCTGATGCCGATGACGGTGGCC TGGTACCTGTCCAAGCGCAACCTGCCGCCGGGACTCAAGCACATGGTGATCAGCCTGGCGATCATCATCACCCCGTTCGTGCTGATCCTGAAGCAGCCCG
Amino Acid Sequence
>penicillin-binding protein 2
MPQPIHLKDHEKDARLVRRRVIVGAVAVVLLTLVLVARMYHLQVTQYEYHSTLSENNRVHVQPIPPTRGIIFDRNGVIIADNRPSFSLTITRERTEDLQK TLDTLVEILGLSEDDRAIFEKRMKQGRRPFEPVPIMFELNEEQIARIAVNQFRLPGVDVATQFVRHYPLKEHFAHSVGYVGRINEQELKNLDPINYSGTH HIGKTGIERFYESELHGTVGYEEVETNARGRVLRVLKRTDPIPGKDIVLSIDSRLQEAAENALAGRRGAIVAIQPSTGDVLAMVSQPSYDPNLFVTGISF KAYAELRDSIDRPLYNRVLRGLYPPGSTVKPAVALAGLDAGVVTPTSRVFDPGYYQLPNYDHKYRNWNRYGDGWVSLESAIYRSNDTYFYDLAHKLGIDR LHAFMSRFGFGQKVALDMFGEADGLMPSREWKRKTRRQAWYPGETLILGIGQGYMQATPIQLAQMTALLANKGHWIRPHLAKTIDGQPPLDPNPMPDIVL RDPANWDRVDYGMQQVVHGARGTARKVGATSVYPIAGKSGTAQVVAIKQNERYDRSKLLERHRDHALFVGFAPANNPQIAVAVMVENGESGSGVAAPVVK QVMDAWLLDEHGKLKAEYAEPVAPLAAAVARPEPTAAEPEAPALEQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site