Pseudomonas fluorescens C2, NL64_RS01730

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain C2 contig_2, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CCAGTCGCCGATGTGCTGGTTCGCCGGTTACGAAGGCGCGCCGACCAAAGCTTTCGTCGGCGACTACTACCTGAGCGGCGACACCGTCGAGTGGAACCCG GACGGCAGCATCAGCTTCGTCGGCCGCAGTGACGATGTGATTACCACTTCCGGTTACCGCGTCGGCCCGTTTGATGTGGAGAGCGCACTGATTGAACACC CGGCTGTGATCGAAGCCGCTGTGGTTGGCAAGCCGGATCCGGAGCGCACCGAACTGGTCAAAGCCTTTGTCGTGATTTGCTCGCAATACCGCGCCACGCC GGAGTTGGCCGAAGAACTGCGTCAACACGTGCGCAAGCGCCTCGCCGCGCATTCATACCCCCGTGAAATCGAATTTGTCAGCGAATTGCCGAAAACCCCA AGCGGCAAATTGCAGCGCTTTATCTTGCGCAACCAGGAAATCGCCAAGGCTCAAGAGGCCGCCGCGAAGAACGTTTCAGCTTGAATCCAAGGAAACAATG
DNA Sequence for Gene
>NL64_RS01730
ATGCAGATCGAAAACAAGGTTTTTCTCGTCACCGGCGGTGCTTCCGGCCTCGGTGCGGCGACCGCTGAAATGCTGGTCGCGGCCGGTGCCAAAGTGATGC TGGTGGACATGAACGCCGAAGCCGTCACGGCCCAGGCTCTTCGGCTCGGCGCGCAAAGTGTTGTTGCTGATATCAGCAACGAAGCGCAGGCCGAAGCGGC GGTGCAGGCCACGGTCAAAGCCTTTGGCGGCCTCAATGGCCTGGTCAACTGCGCTGGCATCGTGCGTGGCGAGAAGATCCTCGGCAAGAACGGCCCGCAT GCGCTGTCCAGCTTCAGCCAGGTGATCAACGTCAACCTGATTGGCAGCTTCAACATGCTGCGCCTCGCGTCGGCAGCGATTGCCGAAAGCGAAGCGGACG CCGGTGGCGAACGTGGTGTGATCATCAACACCGCTTCGGCGGCGGCTTACGATGGCCAGATCGGCCAGGCGGCTTATGCCGCGTCCAAAGGCGCCATCGT TAGCCTGACCTTGCCGGCGGCCCGTGAACTGGCGCGTTTCGGCATCCGCGTGATGACCATCGCCCCGGGCATTTTCGAAACCCCGATGATGGCCGGCATG ACCCAGGAAGTTCGCGATTCCCTGGCTGCTGGCGTGCCGTTCCCGCCGCGTTTGGGTAAACCGGACGAGTACGCCGCTCTGGTCAGGCATATCATCGAAA ACAGCATGCTCAATGGCGAGGTGATCCGTCTCGACGGTGCCTTGCGCATGGCCGCCAAATAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGAGGATTAGTCATGACTATTTCCAACGATCCGATTGTTATTGTCAGCGCCGTCCGCACGCCGATGGGCGGTTTCCAGGGCGAACTGAAAAGCCTCACCG CACCGCAACTGGGTGCCGCTGCGATCAAAGCGGCGGTCGAACGTGCCGGCGTTGCCAGCGATGCGGTTGACGAAGTGCTGTTCGGCTGCGTGCTGCCTGC GGGCCTTGGCCAGGCGCCTGCGCGTCAAGCGGCTTTGGGTGCCGGGCTGGATAAATCGACCCGCTGCACCACCCTCAACAAGATGTGCGGCTCGGGCATG GAGGCGACGATTCTGGCCCACGACATGCTGCTTGCCGGTAGCGCAGACGTAGTGATCGCCGGCGGCATGGAAAGCATGTCCAACGCGCCGTATCTGCTGG ACCGCGCCCGCAGTGGCTATCGCATGGGCCATGGCCGGGTGCTGGACTCGATGTTCCTCGACGGCCTCGAAGACGCCTACGACAAGGGCCGCCTGATGGG
Amino Acid Sequence
>3-hydroxy-2-methylbutyryl-CoA dehydrogenase
MQIENKVFLVTGGASGLGAATAEMLVAAGAKVMLVDMNAEAVTAQALRLGAQSVVADISNEAQAEAAVQATVKAFGGLNGLVNCAGIVRGEKILGKNGPH ALSSFSQVINVNLIGSFNMLRLASAAIAESEADAGGERGVIINTASAAAYDGQIGQAAYAASKGAIVSLTLPAARELARFGIRVMTIAPGIFETPMMAGM TQEVRDSLAAGVPFPPRLGKPDEYAALVRHIIENSMLNGEVIRLDGALRMAAK
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site