Pseudomonas fluorescens C2, NL64_RS17245

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain C2 contig_19, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CTGGGCGCGTGCATCTTTTCCGACCGCATCTGGAAGGTCATCGCCGAGCCGGGCAAGGGCCGCTGCTTCACCCACGGTTTCACCTACAGCGGGCATCCGG TGTGCTGCACGGCGGCGCTGAAGAACATTGAAATCATCGAGCGGGAAAACCTGCTGGCCCATGTCGACGATGTCGGCGGCTACCTGGAGCAGCGTCTGGC CACGCTCAGGAATTTGCCGCTGGTGGGTGACGTGCGTTGCCTGAAATTGATGGCGTGCGTGGAGTTCGTCGCCGATAAGCGCACGAAGGCGTTGTTTGCC GACGAGATCAATATCGGTGAGAAAATCCATTCGCGAGCCCAGGCCAAAGGTTTGCTGGTGCGGCCGATCATGCACCTCAATGTCATGTCGCCGCCGCTGA TTCTCACTTACGCCCAAGTGGATGAAATCGTCGAGATCCTGCGCGAGTGCATTCTGGAAGTGGCGGCCGAGCTTGAGCAGAGCGGCCAGTATTCCGGGCA
DNA Sequence for Gene
>NL64_RS17245
ATGAGTGCTTCAGTCAGGCTTTTACCTAGGGCCTGCTCACCCGCTAGACTGCGGGGCATGAGCAAACCGAACGACGATACGTTGATCGCAATGCCCTTCG GGGCGTTGCACAAATGGCATGGGGGAATGCGCGAGGCATTCGCCCATATCGACGAGCCTGACGCCCTGCAATACCTGGCGTCAGCCTTGGCGCAACTGGT GTCCATCGAGTCGATGATGATCAGCCTGGAGCGCAAGGACCGCGCGCCGCAGTTGCTGCATCAGCGCGGGATTGCCCAGGAGTATCAGGTGTCGATTCTC GAGCGCTATTTTTCCGGCGGCTATTTGCTCGACCCATTTTGCCTGGCGGTGGAGCAGGGGCTGGCGCAGGGGTTCTATCACCTGGAGGAAATTGCCCCGG ACAACTTTTTCGACAGTGACTATTACAAGACTTACTACCTGAACGCGGGTTGTTCGGAAGACAGCTACTACATCGTCGACGCCGGCAATGACACGAAGAT TTCCGTGAGCCTCTTTCAAGGTTTCGGCGGTGAGTGCCTGCGGGTCGAACAGTTGAATGTGTTGCGCGCCGTCGAACCGCTGGTGCGCGAGTTTGTCAGC GAGTTCAGTCAGCGTGGCTTGCAGCGCAATAGCGAAATCCAGAGCAATAACGATCAAGGCCTGCGCGATGATCTCAAACACCGGGTGCAGTCGGCGTTCG AGCAATTCGGTTGCGACGTACTGACCGAACGCGAGCGGGAAGTGGCCCACATGGTACTCAGGGGCCACTCGGTGAAGTCCACGGCCAGCCAGATGAGCAT CTCACCGGAAACCGTGCGCATGCACCGCAAGAATCTGTATATGAAACTGGAAGTGGGATCGCAGTCGGAGTTGTTTGCGCTGTTTATCGAGTGGTTGCGC AAGCACTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ACATAACGCAGGCATTGTAGGAGCTGGCTTGCCAGCGATGGCGGCGTGTCAGTCGACATCTTCGTTACCGATAGATCGCCATCGCCAGCAAGCCGGCTCC TACGGGTTTTGCGGTGGATCAAATTCCTGGGGCCAACCCGTAACCTTGTGGGAGCTGGCTTGCCAGCGATGGCGGTGTGTCAGTCGACAACATCATTACC GATAGATCGCCGTCGCCAGCAAGCCGGCTCCTACAAGGGGCGGTCAGTCTTCGCGTTTGACGACCAAGGTCAAAATGTCATAGCTGGCGACCAACTCGCC GAGCTGGTTGGTGACTTCCACATCCCACGCCACCACCCCTTGCGGAACGCCTTGCGGGCTCTTCTTGCCCTGGTCGATCTTGCGTTTGCAGGTCAGGCGC GCCTGGATGGTGTCGCCGATGCCCACCGGGTTGATGAAGCGCAAGGTGTCGAGGCCGTAGTTGGCCAGCACCGGGCCGACGCCGGGGGATACGAACAAAC
Amino Acid Sequence
>LuxR family transcriptional regulator
MSASVRLLPRACSPARLRGMSKPNDDTLIAMPFGALHKWHGGMREAFAHIDEPDALQYLASALAQLVSIESMMISLERKDRAPQLLHQRGIAQEYQVSIL ERYFSGGYLLDPFCLAVEQGLAQGFYHLEEIAPDNFFDSDYYKTYYLNAGCSEDSYYIVDAGNDTKISVSLFQGFGGECLRVEQLNVLRAVEPLVREFVS EFSQRGLQRNSEIQSNNDQGLRDDLKHRVQSAFEQFGCDVLTEREREVAHMVLRGHSVKSTASQMSISPETVRMHRKNLYMKLEVGSQSELFALFIEWLR KH
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site