Pseudomonas aeruginosa PA7, PSPA7_1019
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa PA7 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GCTCGAACAGTTCGCTCGGCGGCCTGGTAGGGACCAACTTCGGCAGCATCATGGCATCCAGCAGCAAGAACGACGTGCGGGGCGGGAGCCGCAGCCGCAT CGGCGGTCTGGTGGGCGAGAACCAGATCCAGGGACGAATCAGCTCTTCCAGCTCGGAGAGCACCGTCAGCGGCGACTACTACACCACCATGGGCGGTATT GCCGGAGTCAACCTGGGGCGGATCGAGTACTCCGGCGTCAGCGGCAGGATCAACTTCAGGCCGCAATCCAACTATGGGCAGATCTACGGCTCCCTGGTGG GCGAGAACCGTGGCGTCCTCGTCGGCAACTACGTGACCGGCGAGGCGGCGGTCCTGCCGCCTGCCGGCGTCGACTACGGGCAAATCTGGTAAGGCAGGCG GGGAGCCTCCCCGGCAGGGGGGCTCCCTTTCCGCGTCGACGGCGGCCTTCCGGATTCCTGCGGCGGCCGCCTTTTCCACAAGAACATCCTGGAGAATCCC
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| DNA Sequence for Gene |
>PSPA7_1019
ATGAGCGCGAGGTCTTTTCCCTTCGGCCATATCCCCGCCGGACGTGCCTGCCGGCCGCTGCTTCTGTGCTCCCTGCTCGCCGGGCTGTCCCTGCAGCCGG CCTCGGCGCTGGACGAGATCGCGCGCGACTGCACCTTCCGCAACGGCCTGGGAGGCCCCTGGCGCGCAGTCAACGACCTGACCAGCAACACGCCCAAGGG CACCGTGTTGTTCATCAGGCCGGTCAACCTGTTTATCGACTACAAGGTGTCGTACTCCGCGGAGCCGCATGAGTTGATCCTGGGGGGAAACTGGAGCGGG GTCGGCTATCCGGAATCCTTCGGGACGGTACAGACCAACATCCACGGGATCGGCTACCGGATCTCCATGGATGCCCAGGATGGCGTCAAGCGACCGATCC CCATCGATAACATTCCTCACGCCCTCGATCGACGCGCGACCGTCAATGCCGGCGGCGCGGTCAACGACTACCTGCAGGAACTGGTGCTGACGGTCGATCC CAGGGACCTCCCCAGTGGCGAACTGCTGGTCACCCGCGTTTCCGGCAGTGCGATGCTGAACCTCTGGGCGGTGGACATGCTCAAGGGCGAAACGTCCTTG GGGGGGCGCTTCGACATTCCCACCAGCAACACGCCGGTTGGTGTATGCCGGACGCCTTATCGGCTGGTCGGGCCGGAGGCGATCAATATCGGCGGCGGAC CGCCGCCGCTGATTCCTAACAAGTGCAAGGTCGAGGTCGGGCAGACCATCCCGGTCGAGCTGGGCAGCGTCGCGCTGAAGGATTTTCCGCAGATCAACGA TACCTCCAGGGCGCGCCACTTCAGCATCACCCTGAGCGAATGCGCGGCGGCGGCGAAGCCGCAGGTGGCCTTCCAGGACAAGTACGCCTCCGTGGCCCCG GCCGATCCGACGATCCTCAGCCTGAAGAACGGCGGTGCCAAGGGTTTCGGCATCGTCGTCGAGAACGGCCTGGACAGCGGCAGGCGCATCCGCTTCGACG GCACGCCTTACCCGATGCGCCGCGTCGGCGACACCGCCGACATTCCCCTGAGCGCCGCCTACATCCGTACCGGCACCGCGGCCGAGCTCAAGGCCGGGGT GGCCGACGGCGCGGCCGAGTTCAGCTTCACCTTCCCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCGGAGCGGGCGAGGGATTCATGGGGGAGATCACGCCATAGGTCTGCTCCGGTTCCAGAATCGCGGGCTCCACCCCAAGCACAGGTCTAGGGGCGGCGAG CCATCCAGCGAATCCTCGGTACAAGCCCTGGAGAGCGCGCTGCAGCTTGCCATCAGGCGCACTTCGCCGACCATGTGCGCCATGCCTTGCAGGCGATGGA GGATACCGCCCAGGGCCGCGATGTCGCCTGGCATGGCCAGCCCGCGCAGGTTCGCCGGAAGGGCACGGGGTTCGCCACTTGAGGCTGGCACCTCGGCGCC CAGGCGATCCTTGAGCAACGAGGCGATGTCGGCGCTCAGCCGGTCATGGCCGCCGTCGCGGTAGACGATGGCCAGCGGCGGGAAGTCGCGGGTGGTGGTG CCGAGACTGGGTGCGCTTGCGCGGCAGCCAGGCCCGGTTCGTCTTGTCCTGCTGCACGCCCGACCTTAAACGGCAAGTTGATATCGCAACGACCGCCAGT
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| Amino Acid Sequence |
>fimbrial protein CupB6
MSARSFPFGHIPAGRACRPLLLCSLLAGLSLQPASALDEIARDCTFRNGLGGPWRAVNDLTSNTPKGTVLFIRPVNLFIDYKVSYSAEPHELILGGNWSG VGYPESFGTVQTNIHGIGYRISMDAQDGVKRPIPIDNIPHALDRRATVNAGGAVNDYLQELVLTVDPRDLPSGELLVTRVSGSAMLNLWAVDMLKGETSL GGRFDIPTSNTPVGVCRTPYRLVGPEAINIGGGPPPLIPNKCKVEVGQTIPVELGSVALKDFPQINDTSRARHFSITLSECAAAAKPQVAFQDKYASVAP ADPTILSLKNGGAKGFGIVVENGLDSGRRIRFDGTPYPMRRVGDTADIPLSAAYIRTGTAAELKAGVADGAAEFSFTFP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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