Pseudomonas aeruginosa PA7, PSPA7_1018

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Sequence Data

Strain Pseudomonas aeruginosa PA7 chromosome, complete genome. [Details]
DNA Sequence Upstream of Gene
CTGCTCGAGGTGCCATCGCGGGACGAGGGCCGCGACAACCTGCTGCTGCTGAGCTACCGCCTGCGGATGAAGGTCCTGTTTCGCCCGCGGGGATTGCCCG GCGATCCACGGGCGGCCGCCGGACAGGTGGCCTGGCGCCTGTTGCCGGCCGCGTCGCCGGGGAAGCTGGCGGTGCTCGAGGCCGACAACCGTTCCCCCTA TCACGTTTCCCTGACCCGCCTGGAACTGCGCGAGGGGGACGTGGCGATCGCCCTTGGCAACCCGACCCTGCCGCCATTCAGCCGTACCCCGCTGCCACTG CCCAAGCCGGCGCGCGCGGGCGCGCGGGTTCACTACGAGGTCGTGGATGACCAGGGCCGGATCGAGGTCGGCGTGGCGTCGACCGGCCCGCCCGTGGCGG AACACCCCTAGGAGTTCGGCAGGGCCCGGGGAGATGGGGCGCTGCCGCAGCATGGCCCTGCAAATAGGTTGCGGGGCTTCATTGGAGAGGAAGTAGACAG
DNA Sequence for Gene
>PSPA7_1018
ATGAACAAATGCTATGCACTGGTCTGGAACGCATCCCAGGGCTGCTGGAACGTCGCCAGCGAAGGTAGCCGTCGGCGTGGCAAGACCGCTGGCGTACGGG CGGTGGCGGCCTCGCTCCTCGCCCTGATGGGCGCGGGCGCCCTGGCTCCGGCCTATGCACTGCCGACCGACCCCAAGGTGGTGGCCGGCAGCGGAGACAT CCAGTTGGTCGGCGCCAAGAGCATGTCGATCAACCAGCACACCGAGAAGCTGATCACCAACTGGGATTCCTTCAGCGTCGGCGCCGGCGAGCGAGTAACC TTCAACCAGCCAACCTCGGCTTCGATTGCCCTGAACCGGGTGCTCGGCACCAGGGCCAGCGATATCCAGGGCAATATCGACGCCAACGGCAAGGTATTCC TGGTCAACCCCAACGGCGTGCTCTTCGGCCGTAATGCCCAGGTCAACGTCGGTGGCCTGGTGGTTTCGACGCAGGACATCAAGGACGCCGATTTCCTGGC CAGCAAGTTCCAGTTCTCCGGCTCGTCGACCAGCGAAGTGCTCAACATGGGGCGCCTGAGCGCGGCGGAAGGGGGATCCATCGCCTTGCTGGGCGCCCGG GTCGACAACCAGGGGACGATCCTGGCGCAGATGGGCACCGCCGCTCTCGGCGCAGGTGGCGATTTCACCCTGAACTTCGATGGCAACCGGCTGCTCGATA TCCAGGTCAACGGCGCCGTCGTCGGTGCGCTGGCGAAGAACGGCGGCCTGCTGAAGGCCGATGGCGGCCAGGTGCTGATGACCGCCAGGGCAACCACCAC GGTCCTCGGCTCGGTGGTGAACAACCAGGGCGCCATCGAGGCCAGGAGTCTGCGCGGCCAGTCCGGCAAGATCATCCTCGATGGCGGTTCGGGCAAGGTG CTCGTGGCCGGCGCGCTGTCCGCCAACGCGCTGAACGAGCCGGGCCACGGTGGCACGGTGGAGATGAAAGCGGCCGAGGTCGAGGTCAACCTGGCGACCC AGGTGAACACCCTGGCCAGCAACGGCAACAATGGCATCTGGAAGATCAGCGCCGACAAGGTCGACGTCCATCGCACGGCGCTGGCCAGCGGCGGCACCGT GCATGTCGATACCCTGTCGCGCAACCTGGCGACCACCAATATCGAACTGAACTCGACCAAGGGCGACCTGAACCTGAATGGTCCGGTGGCCTGGGCCTCG GGCAACCGGCTGGCGCTGAACTCCGCCGGCGACCTGAACCTGAACGGCAAGCTGACCGCTACCGGCGTCAATGCCAGGCTGGGTCTGCAGGCCAAGGGCG GGATCGAGATCAACGACAAGATCGTGATCAGCGGCGCCTCCAGCGGCATGAGCCTGGAGGCCGGCAACGGACATCGGGTGAACGGCAATGCGTCGGTCAC GCTGTCCGGCGCCAATGCGAGCTATGTCTCGGGCGGTTATTACTACACGGTGGTCCAGACCCTGGCGCAACTGCAGGCGATCAACACCAACCTGGACGGC CTCTACGTCCTCGGCAACAACATCCTGGGCAGCTACTACTGCACGGCATTGCAGTCCATTGGCGGTCCCGCCGGCGTCTTCACCGGAACCCTGGATGGTC TGGGCAACACCATCGGCAACCTCTCGATCACCAACACCGGGGCCAACGTCGGCCTGTTCGCCCGCTCTTCCGGCACCCTGTCCAACCTGAAGCTGGACAA CCTGCGGGTCTCCGACAGCAACTACGGCGCCGGGCCGTCCTCCCTCGGCGCGCTGGTGGGTATCAACAACGGCCTGGTTTCCAATGTCACCGCCACCCGG ATCAGCGTCAATGGCAGCAGTTCGCGCTCCAACGCCGTGGGCGGCCTGGTCGGCCGCAACAACGGCGGGCGGATTCGCGCCGCCAGCGTCAGCGGCACGG TCAGCGGCTACGCGCCCACCACCGCGATCGGCGGTTTGGTCGGCGAGAACGCTTCCAATGGTCGGCAGGCGCTGATCGAGGACAGTAATTCCAGCGTGCA GATCGCCGCCAGGTCCACCGAGCGCAACAGCCTGGGCGGCGTCGGCGGCCTGGTCGGGTTGAATTCGCGCGGCGTGATCAACAACTCCCATAGCCAGGGC CGGGTCGATGCCTCCAGGGCCGGCCTCAACGTGGGTGGCCTGGTCGGTTTCAACCTGATGGGCGAGATATTCCGCAGCAGCGCCAGCGGCCAGGTGGTGG CGGGCAGCGCCGGCTATACTGGCGGCCTGATCGGCTTGAACAGCAACGGTGTGATTTCGCAGTCCCAGGCCAGCGGCATGGTTTTCAGCAGCAGCGGCCT GGCGACCGGCGGGTTGGTGGGCAGGAACGAGGGCGACAGCGAGCTGAGGAACGTCAAGGCCAGCGGCAATGTCACGGACAGCTACGGTACGGACATCGGC GGCCTGATCGGAGTCAATACCGCCGCGCGGGTGGATACCGCCGAGGCGACCGGCAAGGTCACCGGGGGCGCCAACAGCCGGGTCGGCGGTCTGGTCGGCA GCAACATCAGCGCCTCGCTCGATCATGTGATCGCCCGCGGCGCCGTGTTCGGCGGCATCAACAGCCAGGTCGGCGGAATCGCCGGCAGCAACAGCGGCGA GATCTCCAGCGCGGATACCCGCGGCATCGTCTCCGCTGGCTCGAACAGTTCGCTCGGCGGCCTGGTAGGGACCAACTTCGGCAGCATCATGGCATCCAGC AGCAAGAACGACGTGCGGGGCGGGAGCCGCAGCCGCATCGGCGGTCTGGTGGGCGAGAACCAGATCCAGGGACGAATCAGCTCTTCCAGCTCGGAGAGCA CCGTCAGCGGCGACTACTACACCACCATGGGCGGTATTGCCGGAGTCAACCTGGGGCGGATCGAGTACTCCGGCGTCAGCGGCAGGATCAACTTCAGGCC GCAATCCAACTATGGGCAGATCTACGGCTCCCTGGTGGGCGAGAACCGTGGCGTCCTCGTCGGCAACTACGTGACCGGCGAGGCGGCGGTCCTGCCGCCT GCCGGCGTCGACTACGGGCAAATCTGGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGCAGGCGGGGAGCCTCCCCGGCAGGGGGGCTCCCTTTCCGCGTCGACGGCGGCCTTCCGGATTCCTGCGGCGGCCGCCTTTTCCACAAGAACATCCTGG AGAATCCCATGAGCGCGAGGTCTTTTCCCTTCGGCCATATCCCCGCCGGACGTGCCTGCCGGCCGCTGCTTCTGTGCTCCCTGCTCGCCGGGCTGTCCCT GCAGCCGGCCTCGGCGCTGGACGAGATCGCGCGCGACTGCACCTTCCGCAACGGCCTGGGAGGCCCCTGGCGCGCAGTCAACGACCTGACCAGCAACACG CCCAAGGGCACCGTGTTGTTCATCAGGCCGGTCAACCTGTTTATCGACTACAAGGTGTCGTACTCCGCGGAGCCGCATGAGTTGATCCTGGGGGGAAACT GGAGCGGGGTCGGCTATCCGGAATCCTTCGGGACGGTACAGACCAACATCCACGGGATCGGCTACCGGATCTCCATGGATGCCCAGGATGGCGTCAAGCG
Amino Acid Sequence
>adhesive protein CupB5
MNKCYALVWNASQGCWNVASEGSRRRGKTAGVRAVAASLLALMGAGALAPAYALPTDPKVVAGSGDIQLVGAKSMSINQHTEKLITNWDSFSVGAGERVT FNQPTSASIALNRVLGTRASDIQGNIDANGKVFLVNPNGVLFGRNAQVNVGGLVVSTQDIKDADFLASKFQFSGSSTSEVLNMGRLSAAEGGSIALLGAR VDNQGTILAQMGTAALGAGGDFTLNFDGNRLLDIQVNGAVVGALAKNGGLLKADGGQVLMTARATTTVLGSVVNNQGAIEARSLRGQSGKIILDGGSGKV LVAGALSANALNEPGHGGTVEMKAAEVEVNLATQVNTLASNGNNGIWKISADKVDVHRTALASGGTVHVDTLSRNLATTNIELNSTKGDLNLNGPVAWAS GNRLALNSAGDLNLNGKLTATGVNARLGLQAKGGIEINDKIVISGASSGMSLEAGNGHRVNGNASVTLSGANASYVSGGYYYTVVQTLAQLQAINTNLDG LYVLGNNILGSYYCTALQSIGGPAGVFTGTLDGLGNTIGNLSITNTGANVGLFARSSGTLSNLKLDNLRVSDSNYGAGPSSLGALVGINNGLVSNVTATR ISVNGSSSRSNAVGGLVGRNNGGRIRAASVSGTVSGYAPTTAIGGLVGENASNGRQALIEDSNSSVQIAARSTERNSLGGVGGLVGLNSRGVINNSHSQG RVDASRAGLNVGGLVGFNLMGEIFRSSASGQVVAGSAGYTGGLIGLNSNGVISQSQASGMVFSSSGLATGGLVGRNEGDSELRNVKASGNVTDSYGTDIG GLIGVNTAARVDTAEATGKVTGGANSRVGGLVGSNISASLDHVIARGAVFGGINSQVGGIAGSNSGEISSADTRGIVSAGSNSSLGGLVGTNFGSIMASS SKNDVRGGSRSRIGGLVGENQIQGRISSSSSESTVSGDYYTTMGGIAGVNLGRIEYSGVSGRINFRPQSNYGQIYGSLVGENRGVLVGNYVTGEAAVLPP AGVDYGQIW
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site