Pseudomonas fluorescens C2, NL64_RS13175
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain C2 contig_15, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TTGCTCTGGGTGCTGTTGATCTATTTCGGCACCGTGAATCTGATGCGTGCCCTGGGCGAGTTTTTCGGCAACCCCGACCTTGAACTCAACGCCTTCGCCG CTGGCGTGATTGCGCTGGGCCTGTGCTTTGGCGCCTACGCCACGGAAGTGTTTCGCGGCGCGATCCTCGCCATTCCGAAAGGCCATCGTGAGGCCGGCGT GGCCCTGGGCCTTTCGAAGTGGCGGATCTTCACCAAGTTGATCATGCCGCAGATGTGGCGCATCGCCCTGCCCGGCCTGGGCAACCTGTTCATGATCCTG ATGAAGGACACCGCACTGGTGTCGGTGATCGGCCTGGAAGAAATCATGCGTCACGCGCAAATCGGCGTGACCGTGTCCAAGCAACCGTTCACCTTCTATA TGGTCGCGGCGTTCATGTACCTGAGCCTGACGATCCTGGCCATGACCGGCATGCACTTCCTGGAAAGACGCGCCGCTCGCGGCTTCGCGAGGAGCACCCA
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| DNA Sequence for Gene |
>NL64_RS13175
ATGAACTGGGAAGTCATCATCAAGTGGCTGCCGAAACTGGCCCAGGGCGCAACCCTGACCCTGGAACTGGTGGCGATCGCCGTGATCGCCGGCCTGCTGC TGGCGATTCCACTGGGCATCGCACGCTCGTCGCGCCTGTGGTGGGTGCGGGCGTTTCCTTACGGCTACATCTTCTTTTTCCGTGGCACGCCGTTACTGGT TCAGCTGTTCCTGGTCTACTACGGCCTGGCGCAGTTCGACGCGATCCGTAACAGTTCGATGTGGCCCTACTTGCGCGATCCGTTCTGGTGCGCCACCGCC ACCATGACCCTGCACACCGCGGCCTACATCGCCGAGATCCTGCGCGGTGCGATTCAGGCGATTCCACCGGGCGAGATCGAAGCGGCGCGAGCGCTGGGCA TGTCCAAGGCCAAGGCAATGATCTACATCATGCTGCCCCGCGCCGCGCGCATCGGCCTGCCGGCCTACAGCAACGAAGTGATCCTGATGCTCAAGGCCAG CGCCCTGGCCAGCACCGTAACCTTGCTGGAACTGACCGGCATGGCCCGTACCATCATTGCCCGCACTTACCTGCCGGTGGAGATCTTTTTCGCCGCCGGC ATGTTCTACCTGGTGATGGCTTATGTGCTGGTGCGCGGCTTCAAGCTGCTGGAGCGCTGGTTGCGCGTCGATGCCTGCCAAGGACGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TTCCCACGTACTGACGGGCGAGACCCTACTCGCCCGTTTCACGGCGCTCGATGCTTTTCTGACACAGCATCAGGCGCTGTGGAAACCTCGACCGTTCACT CATCTGCAACTTCCTTGGGAAACCTCCTACCCCGAGTTGGCCACTTGGCTACGCGGGCGCTCGCTGGAAGACGCGGAAAACGCTCACAACCAACCCGCCC TTCTGGATGCGCCGGAGCCTTTTGCTTCGTTGGCTGCGATGTCACTGGAATTGAGCACGATAGGTGAACTGCCCGCGCATGCGCTAGAAGCACCGGGTCA TCGCCTGAATGTTGATGTGCCAGGACGCAAGTGGGAGCAAATCGAAGCCTTCGCCAGTCGTTTGTCGTTTGCTTCTGCCCCCACACATTGGCTGGATTGG TGCTCGGGTAAAGGACACTTGGGGCGTCGCCTGCTACAAACCGGCCAACAGCTGACATGCCTGGAATATGACCCGGCGCTAGTTGCCAGCGGCCAAGCCC
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| Amino Acid Sequence |
>ABC transporter permease
MNWEVIIKWLPKLAQGATLTLELVAIAVIAGLLLAIPLGIARSSRLWWVRAFPYGYIFFFRGTPLLVQLFLVYYGLAQFDAIRNSSMWPYLRDPFWCATA TMTLHTAAYIAEILRGAIQAIPPGEIEAARALGMSKAKAMIYIMLPRAARIGLPAYSNEVILMLKASALASTVTLLELTGMARTIIARTYLPVEIFFAAG MFYLVMAYVLVRGFKLLERWLRVDACQGR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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