Pseudomonas fluorescens C2, NL64_RS11030

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain C2 contig_13, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
AGACCAGGAATAAGGAACGGCTGTGCGACTGCGACTGATCGCCGTCGGTTCACGCATGCCCAAATGGGTGGAAGAGGGCTGGCATGAATATGCCAAGCGT CTTCCGTCCGAGCTGGCGCTGGAACTGGTGGAAATTCCGCTCAACACCCGGGGCAAGAATGCCGACGTGGCGCGCTTCATCCGTCAGGAAGGCGAAGCCA TGCTGGCCAAGGTCGGGCCTAACGAGCGCGTTGTGACCCTCGAAGTCCACGGCAAGCCCTGGAGCACCGAGCAACTGGCGGTCGAACTCGATCGCTGGCG GCTGGACTCGCGCACGGTGAATTTCATGGTCGGCGGCCCCGAAGGGCTGGCGCCGGAAGTGTGTGCCCGTGCGGATCAGCGCTGGTCGTTGTCGCCATTG ACGTTGCCGCACCCGCTGGTGCGAATCCTGATCGGCGAACAGCTGTATCGTGCCTGGACAGTGCTGTCCGGCCACCCTTACCACAAGTAGTTCTGCCCTC
DNA Sequence for Gene
>NL64_RS11030
ATGCCTCAGCCGATCCGCATCAAGGACCACGAAAAAGACGCCCGTCTGGTGCGTGGCCGCGTCGTGTTCGGGGCAATTGCGGTCGTGGCGCTGATCGGCG TGTTGATTGCGCGCCTGTATTTCCTCCAGGTGATCCAGTACGACTACCACTCGACCCTGTCGGAAAACAACCGCGTCCACGTGCAGCCGATTCCGCCGAC CCGCGGGTTGATTTTCGACCGCAATGGCGTGGTGATTGCCGACAACCGGCCGAGCTTCAGCCTGAGCATGACCCGCGAACGCTCCGGCGATTGGCAGCAA GTGCTCGACGTGATCGTCGAGGTGCTGGAACTGACGCCTGAAGACCGGGTGATTTTCGAGAAGCGCATGCGCCAGGGGCGTCGGCCGTTCGAGCCGGTGC CGATCCTGTTTGAGTTGACCGAAGAGCAGATCGCCCGCATCGCCGTGAACCAGTTCCGGTTGCCGGGGGTGGAAGTGGTCGCGCAATTGGTTCGGCACTA CCCGCAGGGCGCGCACTTTGCGCACTCGGTGGGCTACATGGGGCGGATCAACGAGAAAGAGCTGAAAACGCTCGATCCAGTGAGCTACAGCGGCACCCAT CAAATTGGTAAAACCGGCATCGAGCGCTTCTACGAGCCGGAGCTGCACGGTCAGGTCGGTTACGAGGAAGTCGAGACCAACGCTCGGGGCCGTGTATTGC GGGTGCTCAAGCGTACCGAACCGATTTCCGGCAAAGACATCGTCCTGAGCCTGGACATCAAACTGCAGGAAGCCGCCGAAGCCGCGCTCGGTGGTCGCCG TGGCGCAGTGGTAGCCCTGGACCCGAAAACCGGCGAAGTACTGGCGATGGTCAGTCAGCCGAGTTTCGACCCGAACCTGTTTGTTACCGGCATCAGCTCC AAGGCTTATTCCGAACTGCGCGATTCCATTGATCGACCGCTGTTCAACCGCGTGCTGCGCGGTCTGTACCCGCCGGGCTCGACGATCAAGCCAGCGGTGG CGATTGCCGGTCTGGACGCCGGCGTAGTGACGGCTTCGACCCGGGTGTTCGACCCCGGTTATTACATGCTGCCCAACTACGATCACAAGTACCGCAACTG GAACCGCACCGGTGACGGCTTCGTCGACCTCGACACGGCGATCATGCGTTCCAACGACACCTACTTCTATGACCTGGCCCACAAGCTGGGGATCGATCGG TTGTCGGCATACATGACCAAGTTCGGCATCGGTCAGAAAGTCTCTTTGGACATGTTCGAAGAGTCGCCGGGCTTGATGCCGACGCGGGAGTGGAAGCGTG CGACGCGCCGCCAGGCGTGGTTCCCTGGTGAAACGCTGATTCTGGGGATCGGCCAGGGCTACATGCAGTCGACTCCGTTGCAACTGGCCCAGGCCACGGC GCTGGTGGCCAACAAAGGCATCTGGAACCGTCCGCACCTGGCCAAGACCATCGAAGGCGAGAAACCGGTGGATGAGAACCCGATGCCGGACATCATCCTG CGTGACCCGTCCGACTGGAACAAGGTCAACCACGGCATGCAACAGGTGATGCACGGCGCCCGCGGTACGGCGCGCAAAGCGTCGATCGGTGCGCAATACC GCATCGCCGGCAAGAGCGGTACGGCCCAGGTGGTCGCGATCAAGCAGGGCGAGAAGTACGACCGCTCCAAGGTTCAGGAGCGCCACCGCGACCACGCCTT GTTCGTTGGTTTTGCACCGGCCGACGACCCTAAAATCGTGGTCTCGGTGATGGTCGAAAACGGTGAGTCCGGCTCCGGCGTTGCTGCGCCGGTGGTGCGG CAGATCATGGACGCCTGGCTCCTGGGCCAGGACGGCCGGTTGAAGCCCGAATACGCCAGCCCTATCAGTGCAGAGGCAACCGCCCGTGATGAATAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TTTTGACCGCATGCTCTCCAGTGAGGATGTGATGCGTCGCCGCGCGACGCTGCTGCAACGCCTGCACATCGACGGGCCGCTGCTGATTTTGCTGCTGACT CTCGCCGCCGGCAGCCTGTTCGTGCTGTATTCCGCCAGTGGCAAAAGCTGGGATCTGTTAGCCAAGCAAGCCACTTCGTTCGGCATCGGTCTGGTGTCGA TGATCGTCATCGCCCAGTTCGAGCCGCGCTTCATGGCTCGCTGGGTACCGGTCGGCTACGTGGTTGGCGTGCTGTTGCTGGTGGTGGTGGACGTGATGGG GCACAACGCCATGGGTGCCACGCGCTGGATCAACATCCCCGGTGTAATCCGCTTCCAGCCTTCGGAATTCATGAAGATCCTGATGCCGGCGACCATCGCC TGGTATCTGTCCAAACGCACCTTGCCGCCGCAACTCAAGCATGTCGGCATCAGCCTGATGCTGATTGGCGTTCCGTTCATCCTGATCGTGCGCCAACCGG
Amino Acid Sequence
>penicillin-binding protein 2
MPQPIRIKDHEKDARLVRGRVVFGAIAVVALIGVLIARLYFLQVIQYDYHSTLSENNRVHVQPIPPTRGLIFDRNGVVIADNRPSFSLSMTRERSGDWQQ VLDVIVEVLELTPEDRVIFEKRMRQGRRPFEPVPILFELTEEQIARIAVNQFRLPGVEVVAQLVRHYPQGAHFAHSVGYMGRINEKELKTLDPVSYSGTH QIGKTGIERFYEPELHGQVGYEEVETNARGRVLRVLKRTEPISGKDIVLSLDIKLQEAAEAALGGRRGAVVALDPKTGEVLAMVSQPSFDPNLFVTGISS KAYSELRDSIDRPLFNRVLRGLYPPGSTIKPAVAIAGLDAGVVTASTRVFDPGYYMLPNYDHKYRNWNRTGDGFVDLDTAIMRSNDTYFYDLAHKLGIDR LSAYMTKFGIGQKVSLDMFEESPGLMPTREWKRATRRQAWFPGETLILGIGQGYMQSTPLQLAQATALVANKGIWNRPHLAKTIEGEKPVDENPMPDIIL RDPSDWNKVNHGMQQVMHGARGTARKASIGAQYRIAGKSGTAQVVAIKQGEKYDRSKVQERHRDHALFVGFAPADDPKIVVSVMVENGESGSGVAAPVVR QIMDAWLLGQDGRLKPEYASPISAEATARDE
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site