Pseudomonas fluorescens C2, NL64_RS10100
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain C2 contig_10, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCTGGATCGCTGGGCAGCCAGCGCTTCACCCAGATCGATGAATACCTGCAACTTCACCAGCGGTGCTTCTGCAATCGGCAGGGTCTGCACACTGCCTCTC ACTTCAAACGTACCGTTCATCACGATCAGCCCTTCCCACCCGACAGGCAGGAAACAGACCGTCGCACACTGAGGCGAGACCAGATACGCGGGGGATTCGC TGACACGCAAATGCAGCAGCCGCTCGCTGAAACGGGCATGAGGGCAACTTGCGGCGCGTATTGATTCGATGTGCACGCCAACCTCCTTTGCGGCCTGACG ATGTAGGTCGGCAGGATGAAAGACATGGCGCGTTGAATCCTGATGTAAAGCTGATGAACCCGCGATGGCATATGCCTTGCACCCGTTCACGCATCAGCAC GCAGGCCAACGACGGAATGAGTGCAAGGACAATGGCGTCGTCATCCGGCCTGGCTTGTAGAAGGGTCTGGGACGACGTTTTTTTTGAAGGTGCGAAATCG
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| DNA Sequence for Gene |
>NL64_RS10100
ATGAACGAACCATCAGCCGGGCCTCTGGCCTGGGTCAATGGCAGCGATGCCCCGGAAAAGACCGAAATCAACCTCGGCTTCATGGCCCTGAGCGACTGCG CCTCAGTGGTTGTCGCCGCGACCCAGGGCTTCGCCCAGCCCTACGGCCTGACCCTGAACCTCAAGCGCCAGTCGTCCTGGGCCAATCTGCGGGACAAACT GGTCAGCGGTGAACTCGATGCCGCCCATAGCCTGTACGGCTTGATCTATGCCGTGCACCTGGGCATCGGCGGCGTGGCCCCGACCGACATGGCCGTGCTC ATGGGCCTGAACCAGAACGGCCAGAGCATCAATCTCTCCCATGGCTTGCAAGGTCTCGGCGTGACCGGTCCTGAAGCGCTTTTTCGGCATGTGCACCAAA GTCGCCCAAAACTGACGTTCGCCCAGACCTTTCCCACCGGCACCCACGCCATGTGGTTGTATTACTGGCTCGCCAGCCAGGGCATTCATCCGTTGCTGGA CGTCGACAGCGTGGTGGTGCCGCCGCCGCAAATGGTCGCGCACCTGCAAGCGGGGCGCATCGATGGTTTCTGTGTCGGCGAGCCCTGGTCGGCCAGCGCG GTGCAGCAGGATCTTGGGTTCACCATGGCGACCACACAAACCATCTGGCCCGATCACCCGGAAAAGGTCCTGGGCTGCACGCGCGAATTCGTCGAGCAAT ACCCCAACACTGCCCGCGCTTTGGTGATGGCGATTCTGGAGGCCAGCCGTTTCATCGAAGAAAGCAGCGAGAACCGCCGCAGCACTGCGCAATTACTCAG CGCGCCGCAGTACCTCGATGCACCGCTGGACTGCATAGAACCTCGTTTGCTGGGCGACTACGCCGACGGCCTGGGTAATCGCTGGCAGGACCCGCATGCC TTGCGTTTCCATGGCGATGGCGAGGTCAATCTGCCGTACCTGTCCGATGGCATGTGGTTCATGACCCAGTTCCGTCGCTGGGGTTTGTTGCGCGACGACC CGGATTACCTCGCCGTGGCCCGCCAGGTCCAGCAACTAGACTTGTATCGTGAAGCGGCCAGCGCGGTTGGCGTCGCGGCACTGGGTAAAGAGATGCGCAG CAGCCAGTTGATCGACGGCAAGATCTGGGACGGTTCGGACCCGGCCGGCTATGCCAGCAGTTTCAAGCTGCACGCCATGAGCGATCGCTCAGCCCTTCTC GCCAGCCGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CAGGAGATTGCGAATATGTTGCGTATCCTGCTGATCAACGACACCGCGAAAAAAGTCGGACGCCTGAAAGCGGCCTTGACCGAAGCCGGGTTCGAGGTGA TCGACGAGTCCGGCCTGACCATCGATCTGCCGGAACGCGTCGAAACGGTGCGCCCGGATGTGATTCTGATCGATACCGAGTCACCGAGCCGCGATGTGAT GGAGCAAGTGGTGCTGGTCAGCCGTGATCAGCCACGACCAATCGTCATGTTTACCGACGAACACGACCCCGACGTGATGCGCCAGGCGATCAAGTCCGGG GTCAGCGCCTACATCGTCGAAGGCATTCACGCACAACGCTTGCAGCCGATTCTCGATGTGGCCATGGCGCGCTTTGAAAGCGACCAGGCCCTGCGCGCGC AACTGCATGCTCGTGACCAGCAACTGGCCGAGCGCAAGCGCATCGAGCTGGCTAAAGGGCTGCTGATGAAAATGAAGGATTGCAACGAGGAAGAGGCCTA
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| Amino Acid Sequence |
>nitrate transporter
MNEPSAGPLAWVNGSDAPEKTEINLGFMALSDCASVVVAATQGFAQPYGLTLNLKRQSSWANLRDKLVSGELDAAHSLYGLIYAVHLGIGGVAPTDMAVL MGLNQNGQSINLSHGLQGLGVTGPEALFRHVHQSRPKLTFAQTFPTGTHAMWLYYWLASQGIHPLLDVDSVVVPPPQMVAHLQAGRIDGFCVGEPWSASA VQQDLGFTMATTQTIWPDHPEKVLGCTREFVEQYPNTARALVMAILEASRFIEESSENRRSTAQLLSAPQYLDAPLDCIEPRLLGDYADGLGNRWQDPHA LRFHGDGEVNLPYLSDGMWFMTQFRRWGLLRDDPDYLAVARQVQQLDLYREAASAVGVAALGKEMRSSQLIDGKIWDGSDPAGYASSFKLHAMSDRSALL ASR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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