Pseudomonas fluorescens C2, NL64_RS00485

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain C2 contig_1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
AAGGTAATGGCATCCCGCTCAAGGGCAAGGTCTACGCCATCGGCCTGATGTGGGCGAGCATCCTGTTTTCCTGCTACCTGGTGCCCCTGCCCTGGGCACG CGGGTTCATGTTGACCAGTGCCGTGCTGGTGACGACTTACATCCTGCGGCAGAAAACCCTGCGCAAGTCCTGAACCTCAATTTTTTTTGTGCCGAGGGAG CTTGCTCCCGCTCGACTGCGCAGCAGTCGCAACAGTAATTGGGGTCGCTTCGCAACCCAGCGGGAGCAAGCTCCCTCGCCACAAAAACGATTATGCGTAA GTTCTTCGTCCAACGACCTGCCCGCCATTCATCAAACACCACCTAGACTGATTCCATCCGTCCCTCCAGCGGCCAGTCTGCGTCATCCAGCATGGCTAAC GCTGTAACGTCGGTCCGGCGGATTCCTGCTTTCCTATTGGCTGGATTGAATTGCGTCCGGGCCAGCCGCAAGTATGTGCAGACGCCGCAAGGAGCACTCC
DNA Sequence for Gene
>NL64_RS00485
ATGAAACTGCGCAATCAGTTGTTTCTCGCTATTTGCCTGTTCTTGCTGGTGGCCTTCAGCGGCAGTTTTTTTGTCAGCCTGGAAAGCTCTCGCGAGCAGA TGCTCGGCCAATTGCGCTCCCACGCCCAGGACGCCGCCACCGCCCTGGGCTTGTCGTTGACGACGCAGATCGATGACCCGGCGATGATGGAGCTGATGGT CAGCTCGATTTTCGACAGTGGCTATTTCAGCAACATCCGCATCGTCGATGTCGAGGGTCAGCAGGTCTTGGTGGAGCGCAGCGCTGCGGCGCGAATCGAG GGCGTGCCCGGTTGGTTTGTCCGTCTGGTCAACCTGCGCCATGAAGGGGGCGACGCGTTGATCATGCGCGGATGGGAGCAAGCAGCACGGGTCGAAGTGC TGAGCAATCCGCAGTTCGCCCTGGCCAAACTCTGGGACAGCACCGTTGGCAGCCTGATCTGGTTGCTGATCTGCGGATTGCTTAGCGCCGTGTTTGGCGG CTGGCTGTTACGTCGCCAGTTGCGGCCGCTCGACAAAATGGTCAAACAAGCTGAAGCCATCAGCAAACGCGAGTTTTTAAGCCTGCCGAAACTGCCGCGC ACTCCGGAGTTGAAGCGCGTGGTGCTGGCGATGAACCAGATGGTCGAAAAGCTCAAGGCGTTGTTCAACGAAGAGGCGGCGCGCAGTGATCGATTGCGCA AGGAGTCCTATCAAGACAGCCTGACCGGGTTGGCGAACCGACGACTGCTCGATGAGCAACTGGCCGACCGTTTGCTGGTCGCCGAGCAAAACGGCGACGG CCATTTGTTGATGTTGCGCCTCAATGACCTCGCCGGGCTTAACCAGCGTCTTGGCGGCCAGCGCACCGATGCCTTGATCAGCACGGTCGGCGAACTGCTC AAGCGTCTGACTGGTCTGCCGGAACGGCGAAACTGGTTGGCGGCGCGCAATCGCGGGGGCGAATTCAGCTTGCTGACTCAAGGCCTGAGTACCGAGGATG CCGCACGTCTGGCCGCCGAGATCAGCGCCACGCTGGAAAACCTGCGCATGACCGGCGCCAGTGATTGCACGCCCGTGGCGCAGTTGGGGATCGTTGCTTA CCATCCCGGCGAGTCGCCTGGCGATGTACTGATGCGCCTTGATCAAGCGTTGAGCGAGGCCAGCCAACATCCCGAGCGCCCGTGGATTTTGCTGAGCCAT CGCGAGGCTACACAGCACCTGTCTCAATACGACTGGCGCACCTGGATTGATGACGCCCTGACTGAAGGCAAGTTACTGCTGTATTTTCAACCGGTGGTGC AATGCGCCGACACCAGTCAACTACTGCACCACAAAGTCCTCGCGCGCCTGCTCGACCCGCAGGGTGAAGCGATTGCTGCCAGGCAGTTCCTGCCTTGGAT CGAGCGCCTCGGCTGGTCGGCGCGGTTTGACCTGGCCATGCTCGAAGCGACCCTCGATTACCTGGCCGTCAATCGCTGGCCCCTGGCGCTGAGCCTGTCC GGCAGCACCCTGCGCGATCCGGAGCACCTGAAGCTGATTTTCGAGATGCTCGATTCCCTGCCAGAACTCGCGCCACTGCTGACCCTGGAAATCGACGAAT GCCAACTGCCGCCGCCGGCCGAATTGCAGCGTCTGAGCCACAGCCTGCTCGACACCGGTTACCGCATCGGCCTGCAGCATTTTGGCGGCAGCTTCAGCCA GATCGGCAACCTGACCCAATTGGGCCTGGCTTATCTGAAAATCGACGGGGCTTACATACGGCACATCGATGAGCAGCGAGACAAACGGCTGTTTATCGAA GCGATCTTCAGAGCGACCAACAGCATTGATTTGCCGTTGATTGCGGAGATGGTCGAGACCCGGGGGGAGTTGGAGGCGATCCGGGAACTGGGGGTGTTCG GGGTGATGGGGAGATTGATCGGACCACCTGAGCCGATGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ATGCCAGGCTTGCCAATAGCCATGAAGGACCTTGATCCTTCTTCGCAGACAAAACAAGCTCCTCTACTTACAAAAAACATTGCCGGACTTTGTTGGCTCG GCTGATACAGACTCATTCATAAAGCGCCTTGTTCGCGTCGACCACTCATCGGCTTTCAGTCAAACCTGACATTTCTGACAGTAGTCAATAGTGCCAAAGG AGAAAACAATAAAAAGTACACGCCGAAATCATCAATGGGCGTTCGCTCAACGAGGTGTACTTACCGTGCTATTTGAAAAAAAACCCTTACCCAATACTGC CCCCCAACTTCCCAAGCCGGAAGTCCCTGAAGCCGACGATGACAATGTACTTGACCTGACTACGCATCAAGGCAAGATATCTGCCATTGTTGAAAAATGG ACGCCTTCGCAAATATGGTTGAGATTAGCTAGCCAGACCGAGCTATATCCACCCCTAACAACAAACATACTCGAAGATCATGAAGTTTCCGCGTTGCAGT
Amino Acid Sequence
>DeoR faimly transcriptional regulator
MKLRNQLFLAICLFLLVAFSGSFFVSLESSREQMLGQLRSHAQDAATALGLSLTTQIDDPAMMELMVSSIFDSGYFSNIRIVDVEGQQVLVERSAAARIE GVPGWFVRLVNLRHEGGDALIMRGWEQAARVEVLSNPQFALAKLWDSTVGSLIWLLICGLLSAVFGGWLLRRQLRPLDKMVKQAEAISKREFLSLPKLPR TPELKRVVLAMNQMVEKLKALFNEEAARSDRLRKESYQDSLTGLANRRLLDEQLADRLLVAEQNGDGHLLMLRLNDLAGLNQRLGGQRTDALISTVGELL KRLTGLPERRNWLAARNRGGEFSLLTQGLSTEDAARLAAEISATLENLRMTGASDCTPVAQLGIVAYHPGESPGDVLMRLDQALSEASQHPERPWILLSH REATQHLSQYDWRTWIDDALTEGKLLLYFQPVVQCADTSQLLHHKVLARLLDPQGEAIAARQFLPWIERLGWSARFDLAMLEATLDYLAVNRWPLALSLS GSTLRDPEHLKLIFEMLDSLPELAPLLTLEIDECQLPPPAELQRLSHSLLDTGYRIGLQHFGGSFSQIGNLTQLGLAYLKIDGAYIRHIDEQRDKRLFIE AIFRATNSIDLPLIAEMVETRGELEAIRELGVFGVMGRLIGPPEPM
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site