Strain | Pseudomonas fluorescens strain C2 contig_1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
ACCGAGGACGGCTTCCTGCGCACCGGCGACAAGGGCGAGGAAGACGCCGAGGGCAACCTGCGCCTGACCGGGCGGCTGAAGGAAATCTTCAAGACCAGCA AGGGCAAATACGTCGCCCCGGCACCCATCGAAAATCGCCTGGCGGTGCATTCGCGCATCGAACAGGTGTGCGTGGTCGGCGATGGTTTGCTTGCGCCGCT GGGCCTGTGCGTACTCTCGGCGGTCGGGCAACAGGAGGCGCGTGCAGGATTGCATTCGAGCCTGGAAAAACTGCTCGAAGAGGTCAACGGCGCCCTCGAT AAACACGAACGCTTGCGCCGTCTGGTGGTGGTCAAGGACAGCTGGGCGGTGGAAAACGGTTTCCTCACGCCGACCCTGAAGATCAAGCGCAATGTGATCG AAGCCGCCTACGGTGCCCGCTTCGAAGAATGGAGCGAGCGCAGCGAGGCGGTGCTGTGGCAGGATTGAGTCACGAATAAAACCAACAAGGAATATTTGCG
|
|
DNA Sequence for Gene |
>NL64_RS00290
ATGAGTCTGTGGCGCACCACTCCCAACATTGAACAGTTGAACGCGATCCAGAAAAACACCATCGGCGAAGTGCTGGATATTCGCTTCGAAGCCTTTGATG AAGAGTCGCTGACCGCGAGCATGGTCATCGACCATCGCACCCATCAGCCGTACGGTTTGCTGCACGGCGGTGCCTCGGTGGTGCTGGCGGAAAGCGTCGG CTCCATGGCCAGTTACCTGTGCATCGACGCCAGCAAATTTTACTGCGTGGGCCTGGAAATCAACGCCAACCATTTGCGCGGCCTGCGCAGCGGGCGGGTG ACGGCGGTGGCCAGACCGATTCACATCGGCCGCACGACCCACGTCTGGGACATTCGCTTGACCAGCGATGAAGGCAAGGCCAGTTGCGTGTCGCGGTTGA CCATGGCAGTGGTGCCGCTGGGTGAGAACCCGCCGGCGCGTTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
ATGAAGTTTCACGGCAAATGAATTCCCCCGTGGCGAGGGAGCTTGCTCCCGCTGGGTCGCGAAGCGGCCCACAACCAGAACCGACGGATTGACGACTGCT GCGCAGTCGGACGCGAGCGAGCTCGCTCGCCACAGGTGCAGTGGTCCATGGACATGGCCGGACTGTCATCATTCCTGTCAGTTACGGTCATTGCTCAAGA ACGCGGTCTTGCGGACAATCGGGCTTTGTTTTCGTTGATGGATCACCGGTATGTCGCAACAGATATTTTTCGCCCACGCCAACGGGTTTCCTTCGGGCAC CTACGGCAAGTTGTTCGCGGCGCTGGCGCCCGAGTATCAGGTGACGCATCTGGAGCAGCACGCCCATGACCCGCGTTTCCCGGCGGACGACAATTGGTAC AACCTGGTGGATGAGCTGATCCATCACCTCGAACAACAGCCGGAACCGGTGTGGGGCGTCGGCCATTCGTTCGGCGGCGTATTGCACCTGCACGCGGCGT
|
|
Amino Acid Sequence |
>esterase
MSLWRTTPNIEQLNAIQKNTIGEVLDIRFEAFDEESLTASMVIDHRTHQPYGLLHGGASVVLAESVGSMASYLCIDASKFYCVGLEINANHLRGLRSGRV TAVARPIHIGRTTHVWDIRLTSDEGKASCVSRLTMAVVPLGENPPAR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|