Strain | Pseudomonas aeruginosa PA7 chromosome, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
CGTCAAGGTCGCCATGCGCGCCCAGGACAAGCCGCGTCTGACCACATTGCGCCTGGCCCTAGCGGACATCAAGCGCGTCGAGGTCGACGAACGCATCGAG GTGGATGACGCCCGCGCCCTGCTGATCCTCGACCGGATGATCAAGCAGCGCCGCGACGCCCAGCGCCAGTTCAGCGACGCCGGCCGCCAGGATCTCGCCG AGGTCGAGGCCGCCGAGATCCTCGTGCTCCAGGACTTCATGCCCAAGCCCCTGGACGACCATGAGATCGACGCCCTGATCGAGCGCAGCATCGTCGACAG CGGCGCCCAGGGCCCGCAGGACATGGGCAAGGCGATGAACCTCCTGCGCCCGCAGGTCCAGGGCCGGGTCGACATGGCGCAGGTCAGCCAGCGCCTGAAG GCGCGCCTCTCCTCCTGAACCACCGCGCCGGCCTGATCGGCCCGGCGATAATTGCTATGCTGCCGCTCTGCGCCCACGCGCCGTCGTTTTCGAGAACACC
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DNA Sequence for Gene |
>PSPA7_0719
|dnaG
ATGGCCGGCCTGATCCCGCAAAGCTTCATCGATGACCTGCTGAACCGCACCGACATCGTCGAGGTGGTGAGTTCGCGCATCCAGCTGAAGAAGACCGGCA AGAACTACAGCGCCTGCTGCCCGTTCCACAAGGAAAAGACCCCCTCGTTCACGGTCAGCCCGGACAAGCAGTTCTACTACTGCTTCGGCTGCGGCGCCGG CGGCAACGCGCTCGGCTTCGTCATGGACCACGACCAGCTGGAGTTTCCCCAGGCGGTCGAGGAACTGGCCAAACGCGCCGGCATGGACGTGCCACGCGAG GAGCGTGGCGGACGCGGACACACGCCGCGCCAGCCGAGCGACTCGCCGCTCTACCCGCTGCTCGCCGCCGCCGCCGAATTCTACAAGCAGGCTCTGAAAA GCCATCCCGCGCGCAAGGCCGCGGTGAACTACCTGAAGGGCCGCGGCCTGACCGGCGAAATCGCCCGCGACTTCGGCCTCGGCTTCGCCCCGCCCGGCTG GGACAACCTGCTCAAGCACCTGGGCGGCGACAATCTGCAGCTCAAGGCCATGCTCGATGCCGGCCTGCTGGTGGAGAACAGCGACAGCGGCAAGCGCTAC GACCGCTTCCGCGACCGCGTGATGTTCCCGATCCGCGACAGCCGCGGGCGAATCATCGCTTTCGGCGGCCGGGTGCTCGGCGACGACAAGCCGAAGTACC TGAACTCCCCGGAGACCCCGGTCTTCCACAAGGGCCAGGAGCTCTACGGGCTCTACGAGGCCCGGCAGAAGAACCGCGACCTCGACGAGATCATGGTGGT CGAGGGCTACATGGACGTCATCGCCCTGGCCCAGCAAGGCATCCGCAACGCGGTGGCGACGCTCGGCACGGCGACCAGCGAGGAGCATATCAAGCGCCTG TTCCGCCTGGTGCCGAGCATCCTGTTCTGCTTCGACGGCGACCAGGCCGGCCGCAAGGCCGCCTGGCGCGCGCTGGAATCGGTACTGCCGAACCTGCAGG ACGGCAAGCGCGTGCGCTTCCTGTTCCTCCCCGAAGGCGAGGACCCGGACAGCCTGGTACGCGCCGAGGGCGAGGACGCCTTCCGCGCGCGCATCACCCA GCAGGCCCAACCGCTGGCCGAGTACTTCTTCCAGCAACTGATGGCGGAAGCCGACCCCGCCACGCTGGAGGGCAAGGCGCATCTGGCGACCCTTGCCGCG CCGTTGCTGGAAAAGATCCCCGGCAACAACCTCCGACAGCTTATGCGTCAGAAGCTGTCGGAAATTACCGGCCTCTCTGGCGAAAATATCGGGCAACTGG CGCAGCAGAGCCCGCCGCCCGCCATGGATCACGGGACGACTGGCGCCTTCGACGGCGACGACTATTTCGCCGCCAGCGCCTACTACGAGAACGAGCCCTC CCACGCACCGTTCGAGAGCGCGCCGGGCTACGCCGACGCGCAGCCGCGCAAGGCCTGGAACAAGGACAGGAAACCCTGGGACGGCAAGAAATGGGATGGC CGGAAGAAATGGGACAAGGGCGGCCGCGGCGACTTCAAGGCGCCGCAGCGAACCCCGGTGAGCGTCGAGTCGACCACCCTCAACGCCCTGCGCACCCTGC TGCACCATCCGCAGTTGGCCTTGAAGGTCGACGACGCGGGCACGCTGGCCAGGGAGCAGGACACCTATGCCCAGTTGCTGGTGTCGCTGCTCGAGGCCCT GCAGAAGAACCCGCGGCAGAGCTCGATGCAGCTCATCGCGCGCTGGCACGGCACGCCCCAGGGCCGCCTGCTGCAAGCCCTGGGCGAGAAGGAATGGCTG ATCGTCCAGGAGAACCTTGAAAAGCAGTTCTTCGACACCATTACTAAACTCTCCGAGAGCCAGCGGTTCGGCGAACGGGAGGAGCGTTTACGCAGCGTCA TGCAGAAGAGCTACAGTGAATTGACCGATGAAGAGAAAGCCTTGCTCAGAGAGCACTACAGTCTTGCCGCTTCATCGCCTTCCCAGAGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
ACTGGCGCCTCAGCCCAGGCATCAGGTATAATCCTCTGCTTATTTTTTGCCCGCCAAGACCTTCAGTGGATAGGGTGTTATGTCCGGAAAAGCGCAACAG CAATCTCGTCTGAAAGAGTTGATCGCCCGCGGTCGTGAGCAGGGTTACCTGACTTACGCGGAGGTCAACGACCACCTGCCGGAGGATATTTCCGATCCGG AACAGGTGGAAGACATCATCCGCATGATCAACGACATGGGGATCAACGTATTCGAGACAGCCCCGGATGCGGATGCCCTGCTGCTGGCCGAGGCGGATAC CGACGAAGCCGCAGCGGAAGAAGCCGCAGCGGCCCTGGCCGCGGTGGAAAGCGACATCGGTCGCACCACCGACCCGGTGCGCATGTACATGCGCGAAATG GGTACCGTGGAACTGCTGACCCGCGAAGGCGAGATCGAAATCGCCAAGCGCATCGAGGAAGGCATCCGCGAAGTGATGAGCGCCATCGCCCAGTTCCCGG
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Amino Acid Sequence |
>DNA primase
MAGLIPQSFIDDLLNRTDIVEVVSSRIQLKKTGKNYSACCPFHKEKTPSFTVSPDKQFYYCFGCGAGGNALGFVMDHDQLEFPQAVEELAKRAGMDVPRE ERGGRGHTPRQPSDSPLYPLLAAAAEFYKQALKSHPARKAAVNYLKGRGLTGEIARDFGLGFAPPGWDNLLKHLGGDNLQLKAMLDAGLLVENSDSGKRY DRFRDRVMFPIRDSRGRIIAFGGRVLGDDKPKYLNSPETPVFHKGQELYGLYEARQKNRDLDEIMVVEGYMDVIALAQQGIRNAVATLGTATSEEHIKRL FRLVPSILFCFDGDQAGRKAAWRALESVLPNLQDGKRVRFLFLPEGEDPDSLVRAEGEDAFRARITQQAQPLAEYFFQQLMAEADPATLEGKAHLATLAA PLLEKIPGNNLRQLMRQKLSEITGLSGENIGQLAQQSPPPAMDHGTTGAFDGDDYFAASAYYENEPSHAPFESAPGYADAQPRKAWNKDRKPWDGKKWDG RKKWDKGGRGDFKAPQRTPVSVESTTLNALRTLLHHPQLALKVDDAGTLAREQDTYAQLLVSLLEALQKNPRQSSMQLIARWHGTPQGRLLQALGEKEWL IVQENLEKQFFDTITKLSESQRFGEREERLRSVMQKSYSELTDEEKALLREHYSLAASSPSQS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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