Strain | Pseudomonas aeruginosa PA7 chromosome, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
GTCCAGTTCGTGCAGCGGCTGGTCGCTTTCCGCTTCCAGTTCGAACCAGCGGGAGGCATCGTTGAAGACCTTCAGCGGGCGCATGCGGCCACGGGCGACA CCGGCCTTCTGGTAGAGGTCCTGCTGTTCCATGTAGAACAGCGACCAGCCGCGGGCCTGGGCCGCCAGCAGCATGGCGAGCGAGCTGTCCTTCTTGAAGT TGATGCGCGCGATGGGGTCCATGACGATCCCGAGGCGTACGCTCATGGGGGTTCCTCCGAAAGGGGGTGAGTTGTCCGGTCGCGGCGGGGAGGCCGCGTG GCAAGCGGGTTTGACGCTCAGGTTGGCGCCCCGTTTGCGCTTGGTCAAGGAAAAAGCCGGCCTGTTCTGGGCATTATGGCTAGAGTTGCGTCGAGTGTGC TAAAAAGGCCCGCGATTGGGTCGCAGCCCGTCGGTGACAGGGCGTTAGCGCACTGAAGAAAACACAGAAGAATGATTCACCGAGTCGATATAGGGCGAAC
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DNA Sequence for Gene |
>PSPA7_0508
|pilG
ATGGAACAGCAATCCGACGGTTTGAAAGTGATGGTGATCGACGATTCGAAAACGATTCGTCGCACCGCCGAAACGCTGCTTAAGAAGGTCGGTTGCGACG TGATCACGGCGATCGACGGCTTCGATGCCCTGGCGAAGATCGCCGATACCCACCCGAACATCATCTTCGTCGACATCATGATGCCGCGCCTGGATGGCTA CCAGACCTGCGCCCTGATCAAGAACAACAGTGCGTTCAAGTCCACCCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGC ATCGTCGGCTCCGACCAGTACCTCACCAAGCCGTTCAGCAAGGAAGAACTGCTGGGCGCGATCAAGGCACACGTACCCAGCTTCACTCCGCTGGACGCCG CTTCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TATCCGGCCGCATGGCCGTTGATGCTTATTTCGTGATGGGGATCCCATGGCTCGTATTTTGATTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACC GCCATGCTGGAAAAGCATGGCCACCAGGTACTCAAGGCCGAGAACGGCGGCGACGGCGTCGCCCTGGCGCGCCAGGAAAAGCCCGACGTGGTCCTGATGG ATATCGTCATGCCCGGCCTCAACGGGTTCCAGGCGACCCGCCAGCTGACCAAGGACGCCGAGACCAGCGCCATCCCGGTGATCATCGTCACCACCAAGGA CCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCGCGCGACTACCTGACCAAGCCGGTGGACGAAGAGACGCTGCTGAAAACCATCAATGCGGTG CTGGCGGGCTGAGCCCGCCGCAGCGCATCGCTCATCCTGACCCGGAAAGACCAGGCCCCGCATGTCGGACGTTCAGACCCCCTTCCAACTCCTCGTCGAC
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Amino Acid Sequence |
>twitching motility protein PilG
MEQQSDGLKVMVIDDSKTIRRTAETLLKKVGCDVITAIDGFDALAKIADTHPNIIFVDIMMPRLDGYQTCALIKNNSAFKSTPVIMLSSKDGLFDKAKGR IVGSDQYLTKPFSKEELLGAIKAHVPSFTPLDAAS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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