Pseudomonas aeruginosa UCBPP-PA14, PA14_71500 (soxA)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa UCBPP-PA14 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CCGCATCCGCTGGCCGCGCCCTTCTCCATCGAACGCTTCCACAGCGGTGCGCTGATCGACGAGCACGGCGCGGCGGCAGTGGCGCACTGACAAAAGCCGC CCGAAGGGCGAAATCCGCTGCCCCTCGCCCTTCAGGGAGAGGGTGCCGGTCAACCGGCAAGAACAGTTTCCGGAGGCTACAAAATGCTGAATATCTTCTG CCCCCACTGCGGCGAACTGCGTTCCGAAGAGGAATTCCACGCCAAGGGTCAGGCCCACATCCCGCGCCCGCTCGACCCGAACGCCTGCAGCGACGAGGAA TGGGGCGACTACATGTTCTTCCGCGACAACCCGCGCGGCCTCCATCACGAGCTGTGGGTGCACGCCGCCGGCTGCCGCAAGTACTTCAACGTCACCCGCC ATACGGTGACCTACGAAATCCTCGAGACCTACCTGATCGGCGAGCAGCCCAGCGTCGTCGCCGACGGTGAGAAGAAACCCGCCGTACAAGGGGAACCGGC
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| DNA Sequence for Gene |
>PA14_71500
|soxA
ATGAGCCAGATCAATCGCCTGTCCAGCGGCGGCCGCATCGACCGCAACCGCCCGCTGACCTTCAGCTTCAACGGCCAGCACTACCAGGGCTATGCCGGCG ACACCCTGGCCGCCGCGCTGCTGGCCAACGGCGTCGACATCGTCGGCCGCAGCTTCAAGTACTCGCGGGCGCGCGGCATCGTCGCCGCCGGCGCCGAGGA GCCCAACGCGATCCTGCAGATCGGCTCCCGCGAAGCCACCCAGATCCCCAACGTGCGCGCCACCCAGCAGGCGCTCTACGGCGGCCTGGTGGCCACCAGC ACCAACGGCTGGCCGAATGTGCAGAACGACCTGATGGGAATCTTCGGCAAGGTCGGCGGCAAGCTGATGCCGCCCGGTTTCTACTACAAGACCTTCATGT ACCCGCAGTCGATGTGGATGACCTACGAGAAGTACATCCGCAAGGCCGCCGGCCTGGGCCGCGCGCCGACCGAGGTCGATCCGGACAGCTACGACTGGAT GAACCACCACTGCGACGTGCTGGTGGTCGGCGCCGGCCCGGCCGGCCTGGCCGCCGCCCTCGCCGCCGCTCGCAGCGGCGCGCGGGTGATTCTCGCCGAC GAGCAGGAAGAGTTCGGCGGCAGCCTGCTGGACACCCGCGAGACCCTCGACGGCAAGCCCGCCGCCGAGTGGGTCGCGGACGCCGTGGCCGAGCTGCAAG GCCTGCCGGAAGTCATCCTGCTACCGCGCTCCACGGTCAACGGCTACCACGACCACAACTTCCTCACCATCCACGAACGGCGCACCGACCACCTCGGCGA GGTCGCCCCGCTCGGCCAGGTCCGCCAGCGCGTGCACCGCGTACGCGCCAAGCGCGTGGTACTGGCCGCCGGCGCCCATGAGCGGCCGCTGGTCTACGGC AACAACGACCTGCCCGGCAACATGCTCGCCGGCGCGGTTTCCACCTATGTACGGCGCTACGGCGTGGCACCGGGCAAGAAACTGGTGCTGGCCACCAACA ACGACTACGCCTACCGCGTCGCCCTCGACTGGCAGGAAGCCGGCCTGCAAGTGGTGGCCATCGCCGACGCCAGGGCCAATCCGCGCGGCGAGTGGGTCGA GGAAGCACGCCAACGCGGTATGCGGGTGATCACCGGCAGTTCGGTGATCGAGGCTCGCGGCGGCAAGCGGGTCAGCGGCGCCAAGGTCGCCCGGATCGAC TTGCAGGCCATGCGCGCCAGCGGCGGCGAATGGCTGGACTGCGACCTGATCGCCAGCTCCGGCGGCTACAGCCCGGTCGTGCACCTGGCCTCGCACCTGG GCGGCAAGCCGGAATGGCGCGAGGAAATCCTCGCCTTCGTCCCCGGCGAAGGCCTGCAGAAACGCATCTGCGCCGGCGCCGTGAACGGCGTGTTCGGGCT CGCCGAGGTGCTCGCCGACGGCTACCAGGCCGGGAGCCGCGCCGCCCTCGACGCCGGCTACAAGACCGCCGCCGGCAGCCTGCCGAAGGTCCAGCCGCGC CGCGAGGAAGCGTCCGTCGCGCTGTTCCAGGTGCCCCACGAGAAGCCCACGGCACGCGCACCGAAGCAGTTCGTCGATCCGCAGAACGACGTCACCGCCG CCGCCATCGAACTGGCCTGCCGCGAGGGCTTCGAGTCCATCGAGCACGTCAAGCGCTACACCGCGCTGGGCTTCGGCACCGACCAGGGCAAGCTGGGCAA CATCAACGGCCTGGCGATCGCCGCGCGGGCCCAGGGCAAGAGCATCGCCGACACCGGCACCACCATGTTCCGTCCGAACTACACCCCGGTGACCTTCGGC GCCGTCGCCGGCCGCCACTGCGGGCACCTGTTCGAACCGGTGCGCTTCACCGCCCTGCACGCCTGGCACGTGAAGAACGGCGCCGAGTTCGAAGACGTCG GCCAGTGGAAGCGGCCGTGGTACTTCCCGCGCCGCGGCGAGGACATGCACGCCGCCGTGGCCCGCGAATGCCGCGCGGTGCGCGAGGCGGTCGGCCTGCT CGACGCCTCGACCCTGGGCAAGATCGACATCCAGGGCCCGGACGCGCGGGAGTTCCTCAACCGGGTCTACACCAACGCCTGGACCAAGCTCGACGTCGGC AAGGCGCGCTACGGCCTGATGTGCAAGGAAGACGGGATGGTCTTCGACGACGGCGTGACCGCCTGCCTGGCCGACAACCACTTCGTCATGACCACCACCA CCGGCGGCGCCGCCCGCGTACTGGAGTGGCTGGAGCTGTACCACCAGACCGAATGGCCGGAGCTGAAGGTGTACTTCACCTCGGTCACCGACCACTACGC GACCCTCACCCTGTCCGGCCCGAACAGCCGCAAGCTGCTCGCCGAAGTCACCGACATCGACCTGGACAAGGACGCCTTCCCCTTCATGACCTGGAAGGAA GGCAAGGTCGCCGGGGTGCCGGCGCGGGTGTTCCGCATCTCCTTCACCGGCGAGCTGAGCTACGAGGTGAACGTCCAGGCCGACTACGCCATGGGCGTGC TCGAAGCGCTCGCCGAGCACGGTGCGAAGTACGGCCTGACACCCTACGGCACCGAGACCATGCACGTCCTGCGCGCCGAGAAGGGCTTCATCATCGTCGG CCAGGACACCGATGCCTCGGTCACCCCGGACGATCTCAACATGGGCTGGGCGGTGGGCCGCAGCAAGCCGTTCTCCTGGATCGGCTGGCGCGGCATGAAC CGCGCCGACTGCCTGCGCGAGGATCGCAAGCAACTGGTCGGACTCAGGCCGAGCAACCCGCAGGAGGTACTGCCCGAAGGCGCGCAACTGGTGTTCGACA CCCAGCAGGCGATCCCGATGAAGATGGTCGGCCACGTCACCTCCAGCTACATGAGCGCCAGCCTCGGCCACGGCTTCGCCCTGGCGGTGGTGAAAGGCGG CCTCAAGCGCATGGGCCAGAAGGTCTACGCGCCGCTGGCGGACGGCCGCTTCATCGAGGCGGAGATCTGCTCCTCGGTGTTCTACGACCCCAAAGGGGAG CGGCAGAACGTGGATTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCGGAGAGGGATGCGCTCCTCTCCCCGGCCCTCTTCCCGAAGGGAGAAGGCAGACAGGCTACCAGGGCGCGCGGCGCCCCAAGGTGAAAACGAATGAGCA AGGCAAACGTCTACCAGCAACGCCCCGAACCCGGCGTCCACGCCGAATCGCCTCTGCACCATGCCGAGCTGCACAAGCTCGCCGGCAAGACCGCCGCGAA GGCCGGTATCGTGCTGCGCGAGAAGAAGCTGCTCGGCCACCTGGTGCTGCGCGGCGATGCCGCCGACCCGGCCTTCGCCGCCGCCGTGCACCAGGCCCTC GGCCTGGAACTGCCGGTGGCCCTGACCCTGGTCGCCAGCGGCGAGACCTCGCTGCAATGGCTGGCCCCGGACGAATGGTTGCTGATCGTCCCCGGCGGCG AGGAATATGCCGTCGAACAGCGCCTGCGCCAGGCCCTGGGCGAGGAGCTGCACTACGCGGTGGTCAACGTCAGCGGCGGGCAGACGCTGCTCGAACTGAG
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| Amino Acid Sequence |
>sarcosine oxidase alpha subunit
MSQINRLSSGGRIDRNRPLTFSFNGQHYQGYAGDTLAAALLANGVDIVGRSFKYSRARGIVAAGAEEPNAILQIGSREATQIPNVRATQQALYGGLVATS TNGWPNVQNDLMGIFGKVGGKLMPPGFYYKTFMYPQSMWMTYEKYIRKAAGLGRAPTEVDPDSYDWMNHHCDVLVVGAGPAGLAAALAAARSGARVILAD EQEEFGGSLLDTRETLDGKPAAEWVADAVAELQGLPEVILLPRSTVNGYHDHNFLTIHERRTDHLGEVAPLGQVRQRVHRVRAKRVVLAAGAHERPLVYG NNDLPGNMLAGAVSTYVRRYGVAPGKKLVLATNNDYAYRVALDWQEAGLQVVAIADARANPRGEWVEEARQRGMRVITGSSVIEARGGKRVSGAKVARID LQAMRASGGEWLDCDLIASSGGYSPVVHLASHLGGKPEWREEILAFVPGEGLQKRICAGAVNGVFGLAEVLADGYQAGSRAALDAGYKTAAGSLPKVQPR REEASVALFQVPHEKPTARAPKQFVDPQNDVTAAAIELACREGFESIEHVKRYTALGFGTDQGKLGNINGLAIAARAQGKSIADTGTTMFRPNYTPVTFG AVAGRHCGHLFEPVRFTALHAWHVKNGAEFEDVGQWKRPWYFPRRGEDMHAAVARECRAVREAVGLLDASTLGKIDIQGPDAREFLNRVYTNAWTKLDVG KARYGLMCKEDGMVFDDGVTACLADNHFVMTTTTGGAARVLEWLELYHQTEWPELKVYFTSVTDHYATLTLSGPNSRKLLAEVTDIDLDKDAFPFMTWKE GKVAGVPARVFRISFTGELSYEVNVQADYAMGVLEALAEHGAKYGLTPYGTETMHVLRAEKGFIIVGQDTDASVTPDDLNMGWAVGRSKPFSWIGWRGMN RADCLREDRKQLVGLRPSNPQEVLPEGAQLVFDTQQAIPMKMVGHVTSSYMSASLGHGFALAVVKGGLKRMGQKVYAPLADGRFIEAEICSSVFYDPKGE RQNVD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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