Pseudomonas aeruginosa UCBPP-PA14, PA14_68700 (ompR)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0051050 positive regulation of transport
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA5200
 ECO:0000249
sequence similarity evidence used in automatic assertion		 19706543
Biological Process GO:0045862 positive regulation of proteolysis
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA5200
 ECO:0000249
sequence similarity evidence used in automatic assertion		 19706543
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00383
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00383
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00383
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Two-component regulatory systems Other UCBPP-PA14 genes in this class
Antibiotic resistance and susceptibility Other UCBPP-PA14 genes in this class
Transcriptional regulators Other UCBPP-PA14 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pau02020 Two-component system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF46894 C-terminal effector domain of the bipartite response regulators IPR016032 Signal transduction response regulator, C-terminal effector 140 240 6.52E-26
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 11 122 6.9E-44
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 7 132 8.25E-43
PANTHER PTHR48111 REGULATOR OF RPOS IPR039420 Transcriptional regulatory protein WalR-like 12 240 1.0E-50
SMART SM00862 Trans_reg_C_3 IPR001867 OmpR/PhoB-type DNA-binding domain 161 238 1.2E-24
Gene3D G3DSA:6.10.250.690 - - - 91 128 3.6E-18
Gene3D G3DSA:1.10.10.10 - IPR036388 Winged helix-like DNA-binding domain superfamily 137 244 4.4E-29
FunFam G3DSA:3.40.50.2300:FF:000008 Two-component response regulator OmpR - - 9 90 1.0E-42
Pfam PF00486 Transcriptional regulatory protein, C terminal IPR001867 OmpR/PhoB-type DNA-binding domain 166 238 5.0E-22
FunFam G3DSA:1.10.10.10:FF:000023 Two-component response regulator OmpR - - 136 245 4.9E-59
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 13 123 4.1E-31
Gene3D G3DSA:3.40.50.2300 - - - 9 90 3.4E-22
CDD cd00383 trans_reg_C IPR001867 OmpR/PhoB-type DNA-binding domain 151 238 9.61597E-27

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.