Strain | Pseudomonas aeruginosa UCBPP-PA14 chromosome, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
AGCGCTTCGCCCTGGGCCTCGGCCTGAGCCTGGACGACGGAGTCCTGCCCGACGCCGCCGACGAGCCGCACAACCTCAGCGCCAAGGTCGAGGCCTTCGA ACGCTCGCTGATCGCCGCCGAGCTGGAACGCCCGCACAATTCGCTGCGTAGCGTCGCCGAGGCCCTCGGTATCCCGCGCAAGACCCTGCACGACAAGCTG CGCAAGCACGGCCTGCCGTTCAACACGCCTGGCGAGAATCCGCCAGATGATGGCGAATGAATGGCGGAATACCGCCAGCCGTTCGCCATTCGCGCCCGCA GCATCTCCCCTGCACGCCCTTGCCCGACTGGCACAGGGCTTGCTCACTGCTTCCCGAGCGTTCCAACAAGCAGAAGACCAGGCGCTTTTCCGATTCACGC AGCATCTGCCGCTGCGCTGCCTAGACTTCCCTTGTTCGGCCACGCCGAGAGGACATCTGTCCTCTTCATAAAAGACAGACAAGAACAAAGAGGAAGTCTC
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DNA Sequence for Gene |
>PA14_68260
ATGCTCAAGCACACCGCGAAGGCGCTCGTCTGCGCACTTTCCCTGACCGTCGCCGGAATCGTCCAGGCGGCCGACCCGATCGTCATCAAGTTCTCCCACG TCGTCGCCGAGCACACGCCCAAGGGCCAGGGCGCGCTGCTGTTCAAGAAACTGGTGGAGGAACGCCTACCGGGCAAGGTCAAGGTGGAGGTCTACCCGAA CTCGTCGCTGTTCGGCGACGGCAAGGAAATGGAGGCCCTGCTGCTAGGCGACGTGCAGATCATCGCGCCGTCGCTGGCCAAGTTCGAGCAGTACACCAAG AAACTGCAGATCTTCGACCTGCCGTTCCTGTTCGACAACATCCAGGCGGTCGACCGCTTCCAGCAGAGCCCGCAGGGCAAGGAGCTGCTGACCTCGATGC AGGACAAGGGCATCACCGGCCTCGGCTACTGGCACAACGGGATGAAGCAACTGTCCGCCAACAAGCCCCTGCGCGAGCCGAAGGACGCCCGCGGCCTGAA GTTCCGCGTGCAGGCCTCCAAGGTGCTCGAGGAACAGTTCAAGGCGGTGCGCGCCAACCCGCGCAAGATGAGCTTCGCCGAGGTCTACCAGGGCCTGCAG ACCGGCGTGGTCAACGGTACCGAGAACCCCTGGTCGAACATCTACTCGCAGAAGATGCACGAAGTGCAGAAGTACATCACCGAATCCGACCACGGCGTGC TGGACTACATGGTGATCACCAACACCAAGTTCTGGAACGGCCTGCCGGAAGACGTGCGCGGCGTTCTGGCCAAGACCATGGACGAGGTGACCGTGGAGGT GAACAAGCAGGCCGAGGCGCTCAACCAGGGCGACAAGCAGCGCATCGTCGAGGCCAAGACCAGCGAGATCATCGAACTCACTCCCGAACAGCGGGCCGAA TGGCGCAAGGCCATGCAGCCGGTGTGGAAGAAGTTCGAAGGTGAGATCGGCGCCGACCTGATCAAGGCCGCCGAAGCCGCCAACCAGGCTCAATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GAAGAAGAGGGAAAGCCCATGCACGCGCTCGCGCGCGTCTGGGCGCGCCTGGAGGAAGGCCTGATCGCCTTCCTCCTCGCCGCCATGACGCTGGTTACCT TCGTTTATGTGGTCCTCAACAACCTCTACACGCTGTTCTACGATCTCGCCGACCTCTGGGAGGGCGGCAACGAGACGCTGCTCGCCATCGGCGACGCCAT CCTCAGCCTGGCCCAGGAGATGACCTGGAGTAACGCCCTGACCAAGGCCCTGTTCGCCTGGCTGATCTTCCTCGGCATCGCCTACGGCGTACGCACCGCC GGGCACCTCGGCGTGGACGTGCTGGTGAAGCTGGCTTCGCGGCCGGTACAGCGGGTCCTCGGCGTGATCGCCTGCCTGGCCTGCCTCGGCTACGCCGGCC TGCTCTGCGTGGCCAGCTACGACTGGGTGAAGACCCTGTTCATCGCCGGCATCGGCGCCGAGGACCTCGACCACTTCGGCATCCGCCAATGGCACATCGG
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Amino Acid Sequence |
>c4-dicarboxylate-binding protein
MLKHTAKALVCALSLTVAGIVQAADPIVIKFSHVVAEHTPKGQGALLFKKLVEERLPGKVKVEVYPNSSLFGDGKEMEALLLGDVQIIAPSLAKFEQYTK KLQIFDLPFLFDNIQAVDRFQQSPQGKELLTSMQDKGITGLGYWHNGMKQLSANKPLREPKDARGLKFRVQASKVLEEQFKAVRANPRKMSFAEVYQGLQ TGVVNGTENPWSNIYSQKMHEVQKYITESDHGVLDYMVITNTKFWNGLPEDVRGVLAKTMDEVTVEVNKQAEALNQGDKQRIVEAKTSEIIELTPEQRAE WRKAMQPVWKKFEGEIGADLIKAAEAANQAQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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