Pseudomonas lutea DSM 17257, LT42_RS23150
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas lutea strain DSM 17257 Contig004, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TTTCGGTCGAGATCGTTGACCAGACAGGGCGAGTACTTGAGCGCACACCCAACCAGCCCTTTCATCTGGTTCGCATCTCGCTGTCGCAGAAACGCCTCGC CCAACCCTGCAAGAACGATGATTACGGCGTGCGACCTGAATGCCCCATCAAAGACAAACCAGAAGAAGAATCGAGCTTTTTTCCCTTTTTTCGATGATGT GGCCAAGCTAGCAAAGCCCCATAATGGTGCATAAGCTGAACGAACTTTCGTTTGATCAGCCCATTTTGGTTCGGGGCCAAGCCATTCATGCACTGTCGCC GCGCCTGCCGTTCAAAAAACGCCCGCATTTCCCCGGACAACGCTTCTTTTCGGAGCCTTGGTTTGGTTTTTGCATTTTGTAATCAATACGCGGACACATC ATACGTTTCAGCGGCTTCATAACGCTGGCAAAAGACCAATCAGAGCCTGCACCGGCGGCGCCGCCGACGTGCATTGAGCCATAAGAGGTCACCGGGATTC
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| DNA Sequence for Gene |
>LT42_RS23150
ATGACTATCAGCGATGCGTTGCATCGGTTGTTACTCGACAACCTGACCACTGCCACGATTCTGCTCAACTCGGACCTGCGTCTGGAGTACATGAATCCTG CTGCTGAAATGCTGCTGGCCATCAGTGGTCAGCGCAGCCACGGGCAATTCATCAGCGAGTTGTTCACTGAGTCGGCTGAAGCGCTCAGTTCGTTGCGCCA GGCAGTGGAGCAGGCTCATCCCTTCACAAAACGAGAGGCGATGCTGACGGCGCTGACCGGCCAGACGCTGACGGTCGACTACGCCGTCACGCCGATTCTC TCCCAGGCTGAAACCATGCTCCTGCTGGAGGTTCATCCCCGTGATCGTTTGCTGCGCATCACCAAGGAGGAGGCGCAACTGTCCAAGCAGGAAACCACCA AAATGCTGGTGCGCGGCCTGGCTCACGAAATAAAGAATCCCCTCGGCGGGATTCGCGGCGCCGCGCAGTTGCTTGCGCGGGAACTGCCGGAAGAAAGTCT CAAGGATTACACCAACGTCATCATTGAAGAGGCAGACCGGCTGCGCAATCTGGTCGATCGCATGCTGGGCTCCAACAAGCTGCCACTGCTGGCAATGACC AACGTCCATGAGGTCCTCGAGCGTGTATGCAGCCTGGTAGAAGCCGAGAGTCAGGGATGCATTACCATCGTGCGCGACTACGACCCGAGCATTCCGGACG TGTTGATCGACCGCGAACAGATGATTCAGGCGGTGCTTAACATCGTACGCAACGCGATGCAGGCCATCAGCAGCCAGAATGAGCTGCGCCTGGGCCGGAT CAGTCTGCGCACCCGCGCCATGCGTCAGTTTACGATTGGCCATGTGCGCCATCGGCTGGTCAGCAAAATCGAGATCATCGACAACGGCCCCGGCATCCCG CCGGAGCTGCAGGAAACCATTTTTTATCCCATGGTCAGCGGCCGCCCGGATGGCACCGGGCTGGGCCTCGCCATTACCCAGAACATCATCAGTCAGCACC AGGGGCTGATCGAGTGTGATAGCCATCCTGGCCATACAACATTCTCGATCTTCCTGCCGCTGGAACAAGGAGCAGCGTCGACATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCCGTAGTGAAACTGTCTGGATCGTCGATGACGACCGTTCCATCCGCTGGGTGTTGGAGAAAGCCCTGCAGCAAGAGGGCATGACCACTCAGAGTTTCGA CAGCGCCGATGGCGTGATGAGCCGACTGGCGCGCCAGCAGCCGGATGTGATCATTTCAGACATCCGCATGCCCGGCGCGAGCGGCCTGGACTTGCTCGCG CGTATCCGCGAACAGCATCCGCGTCTGCCAGTCATCATCATGACGGCGCACTCGGACCTGGACAGCGCAGTGGCGTCCTATCAGGGCGGCGCGTTCGAAT ATTTGCCCAAGCCGTTTGATGTCGACGAAGCCGTCTCACTGGTCAAACGCGCCAATCAGCACGCGCAGGAACAGCAAGGCCTTGATATCCCGCCAACGCT GACCCGCACGCCGGAAATCATCGGCGAAGCGCCGGCCATGCAGGAGGTGTTCCGCGCTATTGGCCGTTTGAGCCACTCCAACATCACCGTGTTGATCAAT
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| Amino Acid Sequence |
>histidine kinase
MTISDALHRLLLDNLTTATILLNSDLRLEYMNPAAEMLLAISGQRSHGQFISELFTESAEALSSLRQAVEQAHPFTKREAMLTALTGQTLTVDYAVTPIL SQAETMLLLEVHPRDRLLRITKEEAQLSKQETTKMLVRGLAHEIKNPLGGIRGAAQLLARELPEESLKDYTNVIIEEADRLRNLVDRMLGSNKLPLLAMT NVHEVLERVCSLVEAESQGCITIVRDYDPSIPDVLIDREQMIQAVLNIVRNAMQAISSQNELRLGRISLRTRAMRQFTIGHVRHRLVSKIEIIDNGPGIP PELQETIFYPMVSGRPDGTGLGLAITQNIISQHQGLIECDSHPGHTTFSIFLPLEQGAAST
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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