Strain | Pseudomonas lutea strain DSM 17257 Contig002, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
AGAACACGCCAATCCGCGTTCGGTCCTCGCTGTACCAGGCATTGATCACAATGTCGTATCGCCCCTCGCTCAGGCCGTGGATCGCTCGTGCCCACGGGAC CTGCTCATACTCGGTGTCATAACCTGCGCGACCCAGCGCAGTGCGAATCAGGTCAGTGGAGAGCCCGTCGTGCAGCAGCGAGACATCGGCATAAGGCGCC CACGCATCGCCAGCCAGACGTAGCGTTTGCGCGACTGCGCCTTGGGCTATCAGCAGCATTCCCAGCAGCACTGCGGCGCACAGCAAACGCGACATGCTCA GCTTCCTTATGGCAACTGGCCTTCAGTGAAGACGCCTTTTGCCGTTTTCACAACTCATAAAAGCAGGATGTTTTGTGCCGGCGTTCAACTAAATGACGTA CGGATCAACGCAACACATCTGGCGCTGCGCGCGGTGAACTTGGGCTGGCGACGTTATGCGTTTAGTATCCGGCATCCACTTCTTCTCGCAGGCCGGCGTC
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DNA Sequence for Gene |
>LT42_RS18135
ATGTCTATCAACTGGATTTGCAAACACCATACCGAGCTTGGAAAAGAGCAGCTGTACGCCATTTTGCAGCTCAGGGCGCAGGTGTTCGTGGTGGAGCAGA AGTGCTGGTACCTGGACGTCGACGGCCAGGATTTACTGGGCGATACCTGCCATCTCATGGCGTGGCAGGGTGATCAACTGGTCGCTTATCTGCGGTTGCT GGACCCCATTCAGCAGAACGGCGACGTGACCATTGGCCGAGTCGTGACTGCCCCGTCAATGCGCAACAAGGGCATGGGGCACGAGCTGATGGTGCAGGCG CTGGAACATGCCGAGCGTCAATGGCCGGACCAGCCGATATTTCTTTCGGCCCAGGCGCACTTGCAGGGTTACTACAGCCGCTATGGCTTCAATCCGGTAG GCGAGATTTATGTCGAAGACGGCATACCGCACATCAGCATGCGCCGCGATCTAGATTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCCGGGGAGTCAGATGGCATAACTGGCTTCAGCCGAGCTCTTAACCCGTGGGACCGCTTTAGCCGAGCTCGCAACCCGTGGGACCGGCTTTAGCCGGGAA GCTTCTGAATCACCTTGCGTCGTCAGGGATACCCCAGCACAGTCTTGATGGACTTTAGATTGCGCTCGATCCACGCTGGCTCGATCGCACCCCAGTCACG AATCCGGTAGCCGCCTGCATGGTTGCGGCCGCCGTCCTGTTGCTCGAACTCACAGACAATGTCCAGATCTGCCAGCGCAGCGATGGTGTCCTGCGCCGTG CGACGTGGCATGCCGGTGATCTCAGTGAGCGCCGGAACACTGCTGGCCGTTTGACTGTCGATCAGATAAGCCACGTACAGACGGCGGTAAAAACTGCTTT TGGTCTTGCTGACGTCCATCGAGACTTCCTTGAATGTGGTGATGCGCCGCTCAGCGCAAGGCGGTCTGCATGTCACGCCAGGTCAGGTAGATACGCAGGT
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Amino Acid Sequence |
>acyltransferase
MSINWICKHHTELGKEQLYAILQLRAQVFVVEQKCWYLDVDGQDLLGDTCHLMAWQGDQLVAYLRLLDPIQQNGDVTIGRVVTAPSMRNKGMGHELMVQA LEHAERQWPDQPIFLSAQAHLQGYYSRYGFNPVGEIYVEDGIPHISMRRDLD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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