Pseudomonas lutea DSM 17257, LT42_RS17940
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas lutea strain DSM 17257 Contig002, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGCGGTCGTGCAAGTTGGCAATGAACGTTCCCAGCTCGGCCCGTAATGGCGCGTTTTCACCGCTTTGCTTGAGCACTTGCCGGATGGTCAGCCCAGGCAG CGGTGTGTAACGCACCGCATCGCGGCTGATGCTGGAAATCCGGTAAGTAGCGATGACGTCCGGGCAGGGGACACCGCGCTTTTTCAGCGCGTCGATGTTG TCAGCGAAGCGTTGCGCGTAAGGAAACAACAAGGCCGAACTGAGCAGGCGCTTGCGGCGGAACAGCTTGAGAATAGTGCCGTCCTCAAGCAACAGAACCT TGTCCCCGGATCCGTCCGCTTCCAGCACGGTGGCGTTTTCTCGCAAAGCCAGATAGGCGCTGTGTTCCAATGGGTGCATCGGCATACTTACCTGAACAAA TGCGGCATGTTACCCGAGTCAGCCCCGCTTGGGTCGCAGCAGGGGTCGACAAATATGGGTTGTGCTACCATGCCCGCCTAATTTTTTCGTGCGGATTCCC
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| DNA Sequence for Gene |
>LT42_RS17940
ATGAGCAGTCCTGATCCTCAAGCTAAAACGACCCTGGCGATTTACTTTCGTCTATTGACCTATGTGCGGCCGTACATTGGCCTTTTCTGCTTGAGCATTG TCGGCTTTCTTATCTTTGCATCCACCCAGCCGATGCTCGCCTACATTCTCAAATACTTCGTCGACGGCCTGGCCAATCCCGAAGCCAGCCTGTTCCCCGG TAACCCTTATATCGGCCACCTGCAATTGCTGCAGGCGGTGCCGCTGATGATCGTATTGATCGCGGCCTGGCAGGGTGCTGGTTCTTATCTGGGTAACTTC TTCCTGGCCCGCGTCTCCCTCGGGCTGGTGCATGACCTGCGTGTCGTGCTGTTCAACAAATTGCTCACGTTGCCCAACCGCTTTTTCGACAACAGCAACT CCGGGCATCTGATCTCGCGCATTACCTTCAACGTGACCATGGTCACCGGCGCTGCCACGGATGCGATCAAGGTCGTGATTCGTGAGGGTATGACAGTCAT CTTCCTGTTCGGCGCACTGCTGTGGATGAACTGGAAACTGACCCTGGTGATGCTGGCGATACTGCCGCTGATCGCTGTCATGGTGAACAGCACCAGCAAG AAGTTTCGCAAGCAGAGCAAGAAGATTCAGGTGGCCATGGGTGACGTCACGCATGTGGCGTCGGAAACCATCCACGGCTACCGGGTGGTCCGCAGCTTCG GTGGCGAAGACTACGAAAAGGCGCGTTTCGAGAAGGCCAGCCGCAGCAATACCAAAAAGCAGTTGGCGATGACCAAGACCGGCGCCGTCTATACGCCGAT GCTGCAATTGGTCACTTACAGCGGCATGGCGATCGTGATGTTTCTGGTCCTGTATCTGCGCGGTGACTCTTCGGCTGGCGACCTGGTGGCATACATCACC ATGGCGGGCCTGCTGCCCAAGCCCATTCGCCAGTTGTCCGAAGTCAGCTCCACCATTCAGAAAGGCGTCGCCGGTGCAGAGAGCATCTTTGAACAGCTGG ACGAAGAGACCGAGCAGGACCTGGGCAGCATAGAGCGCGACAAGGTGTCGGGCCGTCTTGAGGTCAAGAACCTTACCTTCACCTATCCAGGCACTGAAAA GCGTGTGCTGGACGACGTGAGCTTTGTCGCCGAGGCAGGGCAGATGGTAGCGCTGGTCGGCCGCTCCGGCAGTGGCAAGTCCACGCTGGCCAGCCTGATC CCGCGCTTCTACGACCACGTCCAGGGTGAGATTCTGCTCGACGGCGTCGAGACTCAGGATTACACCCTGCGCAGCCTGCGTCGTCAGATCGCACTGGTGA ACCAGAACGTAACGCTGTTCAACGACACCATTGCCAATAACATTGCCTATGGCGATCTGGCCGGCGTGCCCCTCGAAGAAATCAAGAAAGCCTCGGCCGA TGCGTATTCGGACGAATTCATCGATAAGCTGCCTCAGCAGTATCAAACCCTGGTTGGCGAAAACGGCGTGCTCCTCTCCGGCGGTCAGCGTCAGCGTCTG GCGATCGCGCGCGCGTTGTTGAAAAACGCGCCGCTGCTGATTCTCGACGAGGCCACCTCGGCGCTCGATACCGAATCCGAACGCCATATCCAGAAGGCGC TGGAAAAAGTCATGCAGGGCCGCACCACGCTGGTCATCGCGCACCGTCTGACGACCATCGAGAAGGCCGACGTCATTCTGGTGATGGACGAGGGCCGTAT CGTCGAGCGCGGCACGCACGCCGAGCTGCTGGCGAAGAACGGTTACTACACCCGTCTTCACGCCAAACAGTTCGAAGAGGACGAGCCTGTCGAAATTGAC CGGGCAGTCGATGCATGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCCACTTGCGCGCATGGCGTGAGCGAGGCTGGACGGTCATTGATGCGCCGACGTACGCCACGGTATGGCAGCAGTACGGCGGCAGCGTTGCCACTCACCC GCAGGTCATCGCGCGTCTGGCGGGGCTGGTCGATATACCGGTGCGTTATCTCGGTTGGCAGCAGGACGGCAATATCGTCGCTGCCGTAGCGTGCTGGGGC CGGGATCTGGCATTGGCCAAGAAGGTTCTCAAGCAGCGTAATCGGCGCTTTTTCGATCTCGGCAACGCGGAGATTATTTTGCCGGTCGCCCAGGCCGCGA AGGTGTCCGTGCGTCAGCGGATGAGTTATGTCTCGGAGCTGAACGCCGGGCAGATCGCCACCCTCAAACCGCAGGCCGAGAGCTTGGCGATCGCCCGGGC GCCCGAGGACTATTCCAAGAAATTTCGCTACAACCAGCGCCGCGAGCAGCGATTGCTCGAAGAGGCGGGCGGGGTGATGCAGCCAATGCTGGATTTCTCG
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| Amino Acid Sequence |
>lipid transporter ATP-binding/permease
MSSPDPQAKTTLAIYFRLLTYVRPYIGLFCLSIVGFLIFASTQPMLAYILKYFVDGLANPEASLFPGNPYIGHLQLLQAVPLMIVLIAAWQGAGSYLGNF FLARVSLGLVHDLRVVLFNKLLTLPNRFFDNSNSGHLISRITFNVTMVTGAATDAIKVVIREGMTVIFLFGALLWMNWKLTLVMLAILPLIAVMVNSTSK KFRKQSKKIQVAMGDVTHVASETIHGYRVVRSFGGEDYEKARFEKASRSNTKKQLAMTKTGAVYTPMLQLVTYSGMAIVMFLVLYLRGDSSAGDLVAYIT MAGLLPKPIRQLSEVSSTIQKGVAGAESIFEQLDEETEQDLGSIERDKVSGRLEVKNLTFTYPGTEKRVLDDVSFVAEAGQMVALVGRSGSGKSTLASLI PRFYDHVQGEILLDGVETQDYTLRSLRRQIALVNQNVTLFNDTIANNIAYGDLAGVPLEEIKKASADAYSDEFIDKLPQQYQTLVGENGVLLSGGQRQRL AIARALLKNAPLLILDEATSALDTESERHIQKALEKVMQGRTTLVIAHRLTTIEKADVILVMDEGRIVERGTHAELLAKNGYYTRLHAKQFEEDEPVEID RAVDAC
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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