Pseudomonas lutea DSM 17257, LT42_RS16840
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas lutea strain DSM 17257 Contig002, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGAGCGTATAGAAATTCGGAGAAATTCAGAAATGGACTGGACCGAGCGCTTTTAAAGGTTCCTGTGGTCGGCCCGTTGCTCTACAAATCTGCAGTGGCCC GCTACGCGCGAACCTTATCCACAACCTTCGCCGCTGGCGTTCCTCTGGTTGAGGCGCTGGATTCAGTTGCGGGCGCGACTGGCAACGTCGTCTTCAAGAA CGCGGTCAACAAGGTCAAGCAGGACGTTTCCACAGGCATGCAGCTTAATTTCTCGATGCGCAGCACCGGGGTATTCCCAATGCTCGCGGTTCAGATGACC GCCATCGGTGAAGAGTCAGGCGCACTCGATTCAATGCTGGATAAAGTTGCGACGTATTACGAAGATGAAGTCGACAACATGGTTGATAGTCTTACCGCTT TGATGGAACCAATGATCATGGCTGTGCTTGGCGTGATCGTCGGCGGGCTCGTCATCGCTATGTACCTCCCCATCTTCCAGCTCGGAAACGCCGTCTAATC
|
|
| DNA Sequence for Gene |
>LT42_RS16840
ATGCCCCTCCTCGACTTCCTGGCCAGCTCTCCGCTGGCCTTTGTTCTATGCACGCTCATCTTGGGCCTGCTCGTCGGCAGTTTCCTAAACGTCGTTGTCT ACCGTCTCCCAAAAATGATGATCCGCGACTGGAAAATCCAGTCGCGCGAAATGCTCGAACTCCCCCCAGAGCCGCAACCAGAAACCTTCAACCTGATCCT CCCTCACTCGCGCTGTCCGCACTGCTCTCACAAAATCCGAGCATGGGAAAACATTCCGGTCGTGAGTTATCTGTTCCTCGGCGGTAAGTGTTCCCAGTGC AAAGCCCCCATCAGCAAGCGCTACCCGCTCGTTGAGTTATCGTGCGGCTTACTCTCGGCCTTCATCGCTTGGCATTTCGGTTTCGGCTGGGAGGCGGGGG CGATGCTGGTGCTGACGTGGGGTTTGTTGGCGATGAGCCTGATCGACGCCGATCATCAGCTGTTGCCGGACGCTATTGTCTTGCCTCTCCTGTGGCTGGG GTTGATCGTCAATTCGTTTGGGCTGTTCGCTTCGCTGACCGATGCGCTGTGGGGCGCGGTCGCGGGTTATTTGGTGTTGTGGTGCGTGTTCTGGCTGTTC AAGCTGGTCACCGGCAAGGAAGGCATGGGCTACGGTGACTTCAAGTTGCTGGCTATGTTGGGCGCCTGGGGCGGGTGGCAAATTTTGCCGCTGACGATCC TTTTGTCGTCGATTGTCGGGGCGGTTTTAGGGCTGATTCTGCTGCGTTTGCGCAATGTTGAGACCAGCACGCCGATCCCCTTCGGTCCTTATCTGGCACT TGCGGGGTGGATCGCGTTGCTCTGGGGTGATCAAATAACCACTTCGTATTTGCAGATCGCCGGCTTCAGATGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
CCTCTCCTGTTTCAAAATCCTGGATCCTCGGCCTCACTGGCGGTATTGGCAGCGGCAAGAGTGCGGCTGCCCAGTGCTTCGCTGATCTGGGCGTGCATTT AGTCGACGCTGACGACGCTGCTCGCTGGGTGGTTGAACCTGGGCGCCCCGCGCTTGCACAGATCGCAGAGCATTTTGGCGCAGGCGTGCTGCAAGCGGAT GGGACTCTGAATCGCTCGGCCTTGCGTGAGCTGATTTTCAAGGATCCGCAGCAGCGGGTCTGGCTTGAGGGTTTGCTTCATCCGTTGATCCGCGAGGAAA TCCGTCAGTACCTGGCGCGCGCGGAATCGGCTTACGCGATTCTGGTGTCGCCGTTGTTGCTGGAGACTTCTCAGCACCAGATGGTGCAGCGGGTGTTGGT GATTGATGTGCCGGAATCGGTGCAGATCGAGCGCACGGTGATGCGCGACAAGACCAACGAAGAGCAGGTCCGTGCGATTCTCAAGGCACAGGCCAGTCGC
|
|
| Amino Acid Sequence |
>methyltransferase
MPLLDFLASSPLAFVLCTLILGLLVGSFLNVVVYRLPKMMIRDWKIQSREMLELPPEPQPETFNLILPHSRCPHCSHKIRAWENIPVVSYLFLGGKCSQC KAPISKRYPLVELSCGLLSAFIAWHFGFGWEAGAMLVLTWGLLAMSLIDADHQLLPDAIVLPLLWLGLIVNSFGLFASLTDALWGAVAGYLVLWCVFWLF KLVTGKEGMGYGDFKLLAMLGAWGGWQILPLTILLSSIVGAVLGLILLRLRNVETSTPIPFGPYLALAGWIALLWGDQITTSYLQIAGFR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|