Pseudomonas lutea DSM 17257, LT42_RS15025
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas lutea strain DSM 17257 Contig002, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GACGTCGGTTTCCTGGGTGCGGCGCAGGTTGACCGTTTCGGCAACATCAACACCACTGTGGTCGGCGATTATCACAACCCGAAAGTGCGCCTGCCGGGGG CTGGCGGGGCGCCGGAAATCGCCGGTTCCGCGAAAGAGGTGTTGATTATCCTCAAACAGTCACCGCGCACGTTCGTCAATACTCTGGACTTCGTCACCTC GGTCGGCCATGGCGAAGGCGGCGACTCGCGCAAGCGGCTTGGGCTGCCTGGCGCCGGGCCGGTCGGCATCATCACTGACCTGTGCATCATGGAGCCTGAG GCAGGCACGCACGAATTCGTCGTGACCACCCTGCACCCCGGCGTGACCCGCGAGCAAGTAATCGCTGCCACCGGTTGGGCGATCCGTTTCGCCGAAAACG TCGTGGTGTCCGACTCGCCCACCGAATATGAACTGACAGCGCTGCGCGACCTGGAAGCACGGACCGCAGCCGCCCATGGCCAGGCGCCGGGAGAAGCATG
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| DNA Sequence for Gene |
>LT42_RS15025
ATGCGTGAGGTATTTATCTGCGATGCGATTCGCACGCCTATTGGCCGCTTTGGCGGCGCCTTGGCGACTGTTCGTGCGGATGATCTGGCAGCGTTGCCCA TAAAAGCCCTGATGGAACGCAACCCGTCGGTCAACTGGCAGGAGCTGGACGAAGTGTTCCTCGGCTGCGCCAACCAGGCGGGTGAAGACAACCGCAACGT GGCCCGCATGGCCGCGCTATTGGCGGGTTTGCCGGCCAGCGTGCCGGGCGTAACCGTCAATCGTCTTTGTGCCTCCGGGCTTGATGCAGTCGGTTCGGCG TTCCGCGCCATCGCCTGTGGCGAGATGGATCTGGCGATTGCCGGTGGCGTCGAGTCGATGTCCCGCGCGCCCTTTGTGATGGGCAAGGCCGACAGCGCGT TCGGCCGCGGCCAGAAGCTGGAAGACACCACGCTGGGCTGGCGTTTCGTCAATCCGCTGATGCAAGAGCATTACGGCGTCGAAAGCATGCCGCAGACGGG TGACAACGTGGCTGAAGATTTCGGTGTTTCGCGGGAAGACCAGGACGCGTTCGCCGTGCGCAGCCAGCAACGGACGGCGGCGGCCCAGGCATCCGGTTTT TTCGCCGACGAGATCATTCCGGTGCGCATCGCCCATAAAAAAGGCGAGACAGTTGTCGACACCGATGAGCATCCGCGTGCCGACACCAGTCTGGATGGGT TGGCCCGATTGAAGCCAGTCAACGGGTCGGGCAAAACTGTCACTGCGGGCAATGCGGCGGGCCTGAACGACGGCGCGGCGGCAATGATTCTGGCGTCTGC CGACGCGGTAAAGAAACATGGCCTGACGGCGCGTGCCCGCGTGCTGGGCATGGCCAGCGCCGCGGTTGAGCCTCGCGTGATGGGCATCGGCCCGGTTCCG GCAGTGCGCAAGCTGGTGAAACGCCTGGGGCTGACAGTCAACGATTTAGACGTCATCGAACTCAACGAAGCCTTCGCCAGCCAGGCCCTGGCTGTGCTTC GTGAACTGAGCATCGCTGACGACTCACCGAAGGTCAACCCCAACGGTGGCTCGATTTCCCTGGGTCATCCGCTGGGCATGAGCGGTGCGCGTCTGGTGCT GACGGCCTTGCATCAATTGGAGAAGACCGGAGGCAGCACAGCGCTGGCGACCATGTGCGTGGGCGTGGGCCAAGGATTGGCGCTGATCATCGCGCGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GTCGAGATTTCGTCCTTCATTGCCCGAGTCATCCGGTCGTCCCGCGAAAAGGGCAACTTGAGGACTTGGGCGGTTGTCCTTGTGATGACCAAACGTAACT GCTTAAGTCTAAATGTTGCAGGTTATGTCTTAGACTGGCTGACCTTACTAACACCTGGGGAGATAATAATGACAACGACTCACTACACCGGGGAAGAACG ACGCAAGCGAATTTTCGCGATCGTCGGTGCTTCGTCCGGCAACCTTGTGGAATGGTTCGACTTTTATGTCTACGCCTTCTGCGCGATCTACTTCGCACCC GCGTTTTTTCCGTCCGATGACCCGACCGTACAACTGCTGAACACCGCAGGCGTGTTCGCGGCGGGCTTTTTGATGCGCCCCATCGGGGGCTGGCTGTTTG GCCGCGTGGCGGACAAGCACGGTCGCAAAAATTCCATGATGATCTCCGTGCTGATGATGTGCGCCGGTTCGCTGGTCATCGCCTGCCTGCCGACCTACGC
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| Amino Acid Sequence |
>beta-ketoadipyl CoA thiolase
MREVFICDAIRTPIGRFGGALATVRADDLAALPIKALMERNPSVNWQELDEVFLGCANQAGEDNRNVARMAALLAGLPASVPGVTVNRLCASGLDAVGSA FRAIACGEMDLAIAGGVESMSRAPFVMGKADSAFGRGQKLEDTTLGWRFVNPLMQEHYGVESMPQTGDNVAEDFGVSREDQDAFAVRSQQRTAAAQASGF FADEIIPVRIAHKKGETVVDTDEHPRADTSLDGLARLKPVNGSGKTVTAGNAAGLNDGAAAMILASADAVKKHGLTARARVLGMASAAVEPRVMGIGPVP AVRKLVKRLGLTVNDLDVIELNEAFASQALAVLRELSIADDSPKVNPNGGSISLGHPLGMSGARLVLTALHQLEKTGGSTALATMCVGVGQGLALIIAR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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