Pseudomonas lutea DSM 17257, LT42_RS13965
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas lutea strain DSM 17257 Contig002, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGCGAGACGGGCTTTTTTCTTGCGCAGAAACGGCAGGCGGATCAAGGCAAAAACGAGGTAGAGGCCCAGCGCGACGGCGCCATAGGTGGCCAGGTCAAGC ACGGCGCGCCAGACGTTGTTGCCGACCTTCAGCGCCAGGTCCAGCACGCTGATCGCCAGCGCCGGGGCGTATTGATCCCTGGCGGGATCAACAACCGTCG GGCAGAACAACAGCACCGCGCCGATCACCCGCAGCGGCTCGCGCAGGTAGCGCCACATCCAGCCGGTCAGCTTGAACCACACCCACAGACAGCCCAACGC GGCGAACGCGTAGAGGCCCCAGGCAATCAGATAGTCGTTGTCGGTCATGACGTCCGTGGTAAGGCAGGTAAAGAGGCGCTTATGATAACGGCTTTTCACC AGCCCGGCTTCCCCGGCTTCAGTTATCGGTCTGCTGGCTGTGCAACGCCAGGCAGCGCGACCGGTCCCTTACAGATGAGCCCAACGTGAGAGAGCCCAGC
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| DNA Sequence for Gene |
>LT42_RS13965
ATGCCTTCCGCCCCTGACTTTTCCAGTGCCCCTATTGCCCGCAAGGCCGAGGGCAGCGATCCCTATGCATGGCTGCAAAACCGCGACACCGATGAAGTGC TCGATTACCTGAAGGCCGAAAACGCCTGGCAGGAGCAGCAACTCGCCGATTTGCAGCCGTTGCGCGAGACCCTGTTTCAAGAGATCAAGGGCCGCATTCT CGAAACCGACCTGTCTCTGCCCTCCCCTTGGGGTCCGTATCTCTACTACACGCGCACCACCGAAGGCGACGAATACGCCCGTCACTATCGATGCCCGCGT CCGGCAGACGACGCCCTGACGATCGACGAAAGCGCCGAAGAGTTGCTGCTTGATCCCAACGCGCTGGCGGGCGGCGGCTTCTTTTCCCTCGGCGCGTTCA GCATCAGTCCTGACCATCAGCGTCTGGCGTACAGCCTCGACACCAGCGGCGAGGAGGTTTATCAGCTGTTCGTCAAGGAGTTGAGCAACGGCGTGGTCAG CACGCTGCCGTTTGAAGATTGCGATGGCAGCATGACCTGGGCCAATGACAGCCAGACCCTGTTCTTTGGTGAACTGGACGACACGCATCGTCCGCACAAG CTTTATCGCCACACGCTGGGTGACACCGGCGCGCAGCTGATTTTCACCGAGCCCGATGGACGCTTCTTCCTGCACTGCTATCGCAGCAGCTCGGAGCGGC AACTGATTCTGGGGCTGGACAGTAAAACCACCAGCGAAGCCTGGGTGCTGGATGCTGACACACCCGACCAGGCTTTTGCGTGCATCGCGCCGCGCAGCGA GGGTCATGAGTACTCGGTAGACCATGGCCTGATCGAAGGTCAATGGAGCTGGGTGATCCGCAGCAACCAGGACGGCATCAACTTCGCGCTCTATCACGCG CCCGAACAAGCCCATGGCATACCCGAGCGTGGCGACTGGCAGAACCTGATTGCCCACAGCGAGACGGTCATGCTTGACGGCTTCAGCCTCAACGCCAAAG GCCTGACCCTCAGCCTGCGCGAGGGTGGGTTGCCGATCGTCGAGGTTCACCCGCAAGGTTTGCCGGCGTATCGCGTACAACTCCCGGATGCCGCCTACAA CCTGTACGTCCAGGACACTCTTGAATTCGACAGCGACAGGATTCGCTTGCGCTATCAGTCACTGAATCGCCCGCCGCAAGTGTGGCAGTTGTCACTGGCC GCCGGGGATCAAGTCGTACTCAAGGAGACGCCGGTACTGGGCGTGTTTGATGCCAATGCCTACGTCAGCCAGCGGTTGTGGGCCACCGCGCCCGACGGTA CGCAAGTGCCGATCAGCCTGGTGGTCAAACGTGAACTGGCCGGTCAGACCGTTCCACTTTACCTTTACGGTTACGGGGCGTATGGCGCGAGCCTGGACCC GTGGTTTTCTCATGCGCGTCTGAGCCTGCTTGATCGCGGTATCGCCTTTGCCATCGCACATGTGCGCGGGGGCGGTGAGCTGGGCGAGGCCTGGTACCGC GATGGCAAACAGGAGAACAAACAGAACACGTTCAGCGACTTCATTGCCTGCGCAGAGCACCTGGTGGCGCAGAAGCTGACGACAGCCGAGCAATTAGTGA TCAGTGGCGGCAGCGCCGGTGGTCTGTTGATCGGCGCCGTCGTGAACCAGCGTCCCGAGCTGTTCAAGGCGGCCATCGCCGAGGTGCCATTCGTCGACGT GCTGAATACGATGCTCGACCCCGAGTTGCCGCTGACCGTCACCGAGTATGACGAATGGGGCAATCCGCAGGAGCCGGAGGTCCATGCGCGGATCAAGGCT TACGCGCCCTACGAAAACGTCGCGCCGCAGGATTATCCCGCCATGCTGGTCATCGCTGGCTATAACGACAGCCGAGTGCAGTATTGGGAAGCCGCCAAAT GGGTAGCGAAACTGCGCGACCTGAAAACCGACGATCATCCACTCCTGCTCAAGACCGAGCTGGGTGCAGGGCATGGTGGCATGAGCGGGCGTTACCAGGG ATTGCGTGACGTGGCCCTTGAATACGGATTTATCCTCAAAGTGCTGCAAATGGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CAACACCTGCGCCTGCAGGCTGTCACATGAGAGGCCCCGGCACACACACCGGGGCACTTGGCGGCCGGCCAGCGCTTCAAGCAATTTTTCAACACACCCA ACAAGAACTCGCCATGTCTACATCACTGAACCACGAAATACGCGACATGCTGATGGACTGCGGTCTGTTTGTCGCCCTGACACCGGCTGAATTTGCTGCA GCGGCAGGCTATTTCAGCATCAGCAGCATTGAGAAGGGCGACGCGATCTTCAACGAAGGCGACGCGGGCACCTTCATGTGCATCATTCACTCTGGCACGG TCTCGGTGCGCAAGCTCAACGGTGAGGGAATGGCTGTGGAGACTGCCATTCTGCGCAGCGGCCGGGCGTTTGGCGAGATGGCCGTGCTGGACGGAGAGCG CCGCTCGGCGACCTGCGTTGCCGCGTCTTCGTGCTACCTGCTGAACCTGGGCAAGGACTCTCTGGACAAGATGCTCAATGAAGCGCCGAAGGCAGCGGCC
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| Amino Acid Sequence |
>peptidase S9
MPSAPDFSSAPIARKAEGSDPYAWLQNRDTDEVLDYLKAENAWQEQQLADLQPLRETLFQEIKGRILETDLSLPSPWGPYLYYTRTTEGDEYARHYRCPR PADDALTIDESAEELLLDPNALAGGGFFSLGAFSISPDHQRLAYSLDTSGEEVYQLFVKELSNGVVSTLPFEDCDGSMTWANDSQTLFFGELDDTHRPHK LYRHTLGDTGAQLIFTEPDGRFFLHCYRSSSERQLILGLDSKTTSEAWVLDADTPDQAFACIAPRSEGHEYSVDHGLIEGQWSWVIRSNQDGINFALYHA PEQAHGIPERGDWQNLIAHSETVMLDGFSLNAKGLTLSLREGGLPIVEVHPQGLPAYRVQLPDAAYNLYVQDTLEFDSDRIRLRYQSLNRPPQVWQLSLA AGDQVVLKETPVLGVFDANAYVSQRLWATAPDGTQVPISLVVKRELAGQTVPLYLYGYGAYGASLDPWFSHARLSLLDRGIAFAIAHVRGGGELGEAWYR DGKQENKQNTFSDFIACAEHLVAQKLTTAEQLVISGGSAGGLLIGAVVNQRPELFKAAIAEVPFVDVLNTMLDPELPLTVTEYDEWGNPQEPEVHARIKA YAPYENVAPQDYPAMLVIAGYNDSRVQYWEAAKWVAKLRDLKTDDHPLLLKTELGAGHGGMSGRYQGLRDVALEYGFILKVLQMA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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