Pseudomonas lutea DSM 17257, LT42_RS11875
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0008982 | protein-N(PI)-phosphohistidine-sugar phosphotransferase activity |
Inferred from Sequence Model
Term mapped from: InterPro:SSF52794
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
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| Cellular Component | GO:0016020 | membrane |
Inferred from Sequence Model
Term mapped from: InterPro:PF02378
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Molecular Function | GO:0022877 | protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00829
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Biological Process | GO:0009401 | phosphoenolpyruvate-dependent sugar phosphotransferase system |
Inferred from Sequence Model
Term mapped from: InterPro:SSF52794
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Molecular Function | GO:0005351 | carbohydrate:proton symporter activity |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01427
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Coils | Coil | Coil | - | - | 202 | 222 | - |
| CDD | cd05569 | PTS_IIB_fructose | IPR003353 | Phosphotransferase system, fructose-specific IIB subunit | 3 | 98 | 3.77809E-23 |
| PANTHER | PTHR30505 | FRUCTOSE-LIKE PERMEASE | - | - | 109 | 568 | 0.0 |
| NCBIfam | TIGR00829 | JCVI: fructose PTS transporter subunit IIB | IPR003353 | Phosphotransferase system, fructose-specific IIB subunit | 120 | 203 | 2.8E-33 |
| SUPERFAMILY | SSF52794 | PTS system IIB component-like | IPR036095 | PTS system IIB component-like superfamily | 2 | 98 | 1.19E-22 |
| Pfam | PF02302 | PTS system, Lactose/Cellobiose specific IIB subunit | IPR003501 | Phosphotransferase system, EIIB component, type 2/3 | 121 | 210 | 5.9E-20 |
| FunFam | G3DSA:3.40.50.2300:FF:000014 | PTS system fructose-like transporter subunit IIB | - | - | 113 | 219 | 2.3E-36 |
| NCBIfam | TIGR01427 | JCVI: fructose-specific PTS transporter subunit EIIC | IPR006327 | Phosphotransferase system, fructose IIC component | 225 | 562 | 0.0 |
| Gene3D | G3DSA:3.40.50.2300 | - | - | - | 1 | 100 | 4.3E-21 |
| Gene3D | G3DSA:3.40.50.2300 | - | - | - | 109 | 217 | 1.8E-39 |
| Pfam | PF02302 | PTS system, Lactose/Cellobiose specific IIB subunit | IPR003501 | Phosphotransferase system, EIIB component, type 2/3 | 5 | 93 | 2.9E-7 |
| CDD | cd05569 | PTS_IIB_fructose | IPR003353 | Phosphotransferase system, fructose-specific IIB subunit | 119 | 211 | 1.02324E-39 |
| SUPERFAMILY | SSF52794 | PTS system IIB component-like | IPR036095 | PTS system IIB component-like superfamily | 118 | 217 | 2.96E-35 |
| Pfam | PF02378 | Phosphotransferase system, EIIC | IPR003352 | Phosphotransferase system, EIIC | 243 | 506 | 1.6E-16 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.