Pseudomonas lutea DSM 17257, LT42_RS10310
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas lutea strain DSM 17257 Contig001, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GACACATTGACGCCTGTCAACCGATTGCCGAGCGATCTGACGCACTATATGATGTGTCTCGCAACACGAAGACACACTAGATACGTGATCCGTCCAATTT CGGCAGCGTTTTTTCCAACGCACGAATCGGGAATTAACGCAAAGGAAAACGACGGCAAATCAGCCCTCGGATTCCGTCACGGACGAACCTGCGCCGGGCA AAATCTGTATAATCCGCGCTCATCCAGGGTACTCAAAATGACCGCTTGCACCCGCCAAACCGTCACTCTGAAATCAGCCTCCGTTGACTTGTTTCGCAGG TGCGCCGCAGGCAGCCCTCGCAGTATGTTCGTCGATCGATTTGAAGCAGCATTTAGCGCCTTTTTCGATCAATCACAGTAGTAACCAGAACCACCCAACC TATTTCCCGTTGCCAGCCCCGCTATCAGCAACGCTGGCAACGCTTACTTTGAAATCCACAGGCCGCTTAAAACCGGTCCTCTAGCAGGAGCCTCCTCACC
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| DNA Sequence for Gene |
>LT42_RS10310
ATGCTGAGCTGGGACGAATTCGACAAAGAAGACGCCGCTGAACCCGCCAAAGGCGCCAACGCCGGCCACGCTTCCGAAGCCGCGATGGACAAACTCGACA GCGCCGGTGGTGCTGCTGCGCTTGAAGCCCGCGCCGTCAGCGCAAACGACTCCGACGCCATTGCCCGCGCCAAAGCTGCGCTGGACAAACTGGACGTCGC TGAAGGTCTTGCCGAACTCGAAGGCTCCGCCGCCCGCGTCGCGGTCGACGAAAAACGCATGATCAACTGCCGCGCCGACCTCAACCAGCTCGTGCCATTC AAGTACGACTGGGCCTGGCAGAAGTATCTTGACGGATGCGCCAACCACTGGATGCCGCAAGAGGTCAACATGACCACGGACATCGCCCTCTGGAAAGACC CGGAAGGCCTGACCGACGACGAGCGCCGCATCGTCCTGCGCAACCTGGGCTTCTTCTCCACCGCCGACTCCCTGGTTGCCAACAACCTCGTGCTGGCCGT GTATCGCCTCATCACCAACCCTGAATGCCGCCAGTACATCCTGCGCCAGGCCTTCGAGGAAGCGATCCACACCCACGCCTACCAGTACTGCATCGAATCG CTGGGCATGGACGAAGGCGAGATCTTCAACATGTACCACGAGATCCCGTCAGTCGCCAAAAAGGCAGCCTGGGGCTTGAAGTACACCCGTTCGATCTCCG ATCCGAAGTTCGAAACCGGCACCGTCGAGACCGACAAAGAACTGCTGCGCAACCTGATCGCCTACTACTGCGTTCTGGAAGGCATCTTCTTCTACTGCGG CTTCACCCAGATCCTCTCCATGGGTCGCCGCAACAAAATGACCGGCGTCGCAGAACAGTTCCAGTACATCCTGCGTGACGAGTCCATGCACCTGAACTTC GGCATCGACGTGATCAACCAGATCAAAATCGAAAACCCGCACCTGTGGGATGCCGAAATGAAAGAAGAAGCCACCCAGATGATCCTGCAAGGGACCCAGC TGGAAATCGAATACGCCCGCGACACCATGCCCCGCGGCGTACTCGGCATGAACGCAGCAATGATGGAGGACTACCTCAAGTTCATCGCGAACCGTCGTTT GAGCCAGATTGGTTTGAAGGAAGAGTACCCAGGGACCACCAACCCGTTCCCATGGATGAGCGAGATCATGGACCTGAAGAAAGAGAAGAATTTCTTTGAG ACGCGGGTTATTGAGTATCAGACCGGTGGGGCGTTGAGCTGGGATTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ACGATCCGTTACACCAAGGGTGCCGTTAGTAACTTAGCACCCTTGGAGCATTAATAACTCACGATCCAAATATATTCGCTAAAAATGACGAGAACCCCTC CGTTAGTCAAACGAGATAGTTGCTGTTTAAGGTCAATACACGGAAACCATTAGAGATCAAGGATGCCTTATGACATATCCGTGCTGGAAGGTGGTACAGA ATCGCATCACTCTAGTGACCTCCGAGAAGATTGAGTCAAGTCCAACCGCCGCGGAGGTCTTTAACCAAGCCTTTAACGACAACCCGGACATCTCGCAACG TATAAGACAGGATCTACACCCTTTAGAACTCTCAAGATTCGCTCCTGAATTAGCTGTTCGTATAGGAGGCAGTCCCCCCTCTAATATGACCTTTGAAACC GGCTTGATAGTCGACGGTAGGTTCCACACTGCGGAGTGGCAATACGACCAATGCATCATTGATAACTGTTGGTACCCGATTGATACTAATTTCGTAGATG
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| Amino Acid Sequence |
>ribonucleotide-diphosphate reductase subunit beta
MLSWDEFDKEDAAEPAKGANAGHASEAAMDKLDSAGGAAALEARAVSANDSDAIARAKAALDKLDVAEGLAELEGSAARVAVDEKRMINCRADLNQLVPF KYDWAWQKYLDGCANHWMPQEVNMTTDIALWKDPEGLTDDERRIVLRNLGFFSTADSLVANNLVLAVYRLITNPECRQYILRQAFEEAIHTHAYQYCIES LGMDEGEIFNMYHEIPSVAKKAAWGLKYTRSISDPKFETGTVETDKELLRNLIAYYCVLEGIFFYCGFTQILSMGRRNKMTGVAEQFQYILRDESMHLNF GIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYARDTMPRGVLGMNAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFE TRVIEYQTGGALSWD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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