Pseudomonas aeruginosa UCBPP-PA14, PA14_59250 (pilN2)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa UCBPP-PA14 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GTGCTCCCCCCAGCCGCACCGGCCAAGGATGGCCACCCCTCTTCTCCTCCCGCGGCTTCGGCACCGACCAAGCCTGCGGCCTCCGCCGTGAAGTCCACGC CGCCCACTCCACCCACCGTGGCTTCCGCCCCACCGGTCAAGGTGCTCACGCCGCCGGAACCGAGCCGGCCGCTGGCACAGGCCTGGTCAGCCGAGACGGG ATCAACCCTGCGCGACACCTTGGAAGCTTGGGCAAAGCGCGCACGCTGGACCGTCCGCTGGGAGCCGCAGGATCTCAACTATCCGATCGAGGCTCCACTG ACCTTCCACGGCTCCTTCGAGGACGCGGTATCCGAGCTGTTCCCCCTGTATGACGCTGCCGAACGGCCCTTCCTGGTGAACGCCAGCCGCCCGCAGTCCC TGATCATCATCAAGGAGCGCAAGAACTGATGCGTGCCCCCCTGAAGAACCTCTTGGCTTGCCTCCTGATCCCCGCGCTGGCCAGTTGCTCGGTCACGCGG
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| DNA Sequence for Gene |
>PA14_59250
|pilN2
GTGAACGAGTCGGCGGATCGTGTCGAAGCTACGGCAGATTCCGCGTCTACGATCGCAGCGCAGGTGCGCAACACCCGACCGGATCGGCGCGATACGGTGG TGTTCTCCGACAAACCCTGGGTCAGCACGAAACCCCTAAGCGTTTCGCACACCTTGTCCAGTGACTGCATCGTGACGTGGCGCCCTGCAGGCGCAGCGTC GCTGCAGGAGGCCGCCCAGGAAGTCATCAACCAATGCCACATGGCGGTCAGTATCACGCCCGACGCGCTGAACCCGGCCGCCTTCGCCGTGCAACCTCAG CAGCGCGCGAGCAACGCCCCGCCGCCCATCCAAGGCGGCCAGGACATGGCCACCATGCTGTTTCCTGCCTCCGTCGCCAACGGCATGTCGCTCGGTGCCG GCGGCAGCATGGGGTCGAGCTTCGGGTCCTACGGTCCGCGGTCTCTGTACAACATCAAATGGAACGGCAAAGTCAGCGGGTTCCTCGATCTCATCGCCGC CCGAGCCGGCGTGTCCTGGCGCTACAACCCAACCGAGAAAAGGGTCGAGTTCTACTACCTGGACACTCGGACCTTCCGCATCTACGCCTTCGACGACGTC AACACGGTGGACTCCACCGTGCGTTCCGGTATGACGACGGCCGCCGGCATCAGCGGGGACGGCTCCGGATCCACCGGACAGAATGGCAGCTCCGGCATCA GCGGCGACTCCGGCAGCAAGCAGACCACCAGCTCGGAGCTGAAGACATCGATCCTCAGCGACATCGAGAACAGCATCAACTCGATGCTGACGCCGAGCAT GGGACGCATGTCGCTGTCGCGTGCCACGGGCACCCTGACCGTCACCGACCGTCCAGAAGTCCTCAACCGTGTCCAGCAGTTGGTCAACCGAGAGAACGAG AGCATCACCAAGCAGGTGCTGCTGAACGTCAACGTGCTCTCGGTCGCCCTGACCGACAAGGATCAACTGGGGATCGACTGGAACCTGGTCTACAAGTCGC TCAACAACAAGTGGGGCATCGGCCTGAAGAACACCATGCCGGGCATCGATCAAAGCGCGATCTCCGGCTCCGTGAGCATCCTGGATACCGCCAACAGCGC CTGGGCAGGATCCAAGGCCATGGTCCAGGCGCTGGCCCAGCAGGGCCGCGTCTCGACCGTCCGATCCCCGTCCGTGACCACGCTCAACCTCCAGTCGGCG CCGATCCAGATCGGCCGCTACGACAGCTACCTGGCCTCCAGCCAGATCTCCAACGTCGCCCAGGTCGGCAGTACCACCTCGCTGATCCCGGGCGCCGTGA CCAGCGGCTACAACATGAGCCTGCTGCCGTTCGTGATGGAAAGCGGCGAGATGCTGCTGAAGATCAACATCAACATGACCTCCCGGCCGACGTTCGAAAT GCAGACCAGCGGGGACTCCAAAGCCCAGTTCCCGAGCTACGACATACAACTGTTCGACCAGAAGGTACGTCTGCGCAGCGGCGAGACCTTGGTACTCTCC GGCTTCGACCAGACCACCGAGGACACCAACAAGGTCGGCACCGGCGACGCTGGGTTCTTCGGTCTTGGCGGCGGGCTGACCCGCAATACCAAGCGCGAGG TCATCGTGGTGCTGATCACCCCCGTCGTGCTGGGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ACCATGGAGAAGCCTGACCTCGGCAGCCGTGGACCAGACGTCTCGATCCTGAGCTACCACGGCAACAAGTTCGTCAGCGGCCTGTTCTGGCGGCCGCTGT CCAGCCAGCGGCAGTACATGAAGGAAGCGCGCAAGCTGGGCAAGGAAGAGCATCTGGACATCGTTGCCATCCGCCATTCACCGACGGTGATCCAGGCCGG CTTCGTTTCGAAGTCGCAAGGCGCAGTCAAGGGGATGTACTCCCTGGCCTCGGCGCTTTCAGGCCAGTTCGACGGCGACTTCCTGGCCTGCTGGAAAGTC GACGAGGACCGCTACGCGCTGGTCGCCACGCTCGATGGCGCGATTGTCCCCGGGCAGGATCTGGTCACCACCCTCGACGAGGCCCGGGACCGGGTCAGGA AGCTCTCTACGCGCGGCGTGCTGCGAAACGCACAGGTCTTCGTTCCCGAAGGGTTCGATTTCCCCGTCAAGGACTTCGACATCGAGGAACTGCTCGCGCC
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| Amino Acid Sequence |
>PilN2
MNESADRVEATADSASTIAAQVRNTRPDRRDTVVFSDKPWVSTKPLSVSHTLSSDCIVTWRPAGAASLQEAAQEVINQCHMAVSITPDALNPAAFAVQPQ QRASNAPPPIQGGQDMATMLFPASVANGMSLGAGGSMGSSFGSYGPRSLYNIKWNGKVSGFLDLIAARAGVSWRYNPTEKRVEFYYLDTRTFRIYAFDDV NTVDSTVRSGMTTAAGISGDGSGSTGQNGSSGISGDSGSKQTTSSELKTSILSDIENSINSMLTPSMGRMSLSRATGTLTVTDRPEVLNRVQQLVNRENE SITKQVLLNVNVLSVALTDKDQLGIDWNLVYKSLNNKWGIGLKNTMPGIDQSAISGSVSILDTANSAWAGSKAMVQALAQQGRVSTVRSPSVTTLNLQSA PIQIGRYDSYLASSQISNVAQVGSTTSLIPGAVTSGYNMSLLPFVMESGEMLLKININMTSRPTFEMQTSGDSKAQFPSYDIQLFDQKVRLRSGETLVLS GFDQTTEDTNKVGTGDAGFFGLGGGLTRNTKREVIVVLITPVVLG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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