Pseudomonas aeruginosa UCBPP-PA14, PA14_58770 (pilD)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa UCBPP-PA14 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GAAGCTCATCGGCGCTCGCAAAAACTGAGAGATTCAGTAGATCGGGGCCTGCTGAAACTACCTATCATCGGCGGGATACTTTACAAATCAGCTATCGCCC GCTACGCCCGAACGCTATCCACTACCTTTGCGGCTGGAGTGCCTCTGGTAGAAGCTCTGGACTCCGTTTCCGGAGCAACTGGCAACGTGGTATTCAAGAA TGCCGTTACCAAGATCAAACAAGACGTGTCCAGCGGCATGCAATTGAACTTTTCCATGCGCACCACCAATGTTTTCCCCAGTATGGCTATCCAGATGGCT GCAATTGGCGAGGAATCAGGTTCGCTAGATGAGATGTTAGGAAAAGTTGCCGGTTTCTATGAGGAAGAAGTCGATAACGCCGTCGACAACCTGACAACGT TGATGGAGCCGATGATCATGGCCGTGCTCGGCGTACTGGTCGGCGGCCTGATCATCGCTATGTATCTACCGATCTTCCAACTGGGTTCCGTTGTGTAAAG
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| DNA Sequence for Gene |
>PA14_58770
|pilD
ATGGAACTCCTCGACTACCTGGCCAGCCATCCGCTGGCCTTTGTCTTGTGCGCCATCCTCCTTGGCCTGCTGGTCGGCAGCTTCCTCAACGTCGTCGTGC ATCGCCTGCCGAAGATGATGGAGCGCAACTGGAAGGCCGAGGCCCGCGAAGCGCTCGGGCTGGAGCCGGAACCCAAGCAGGCGACCTACAACCTGGTGCT GCCGAATTCGGCGTGCCCGCGCTGCGGCCACGAGATCCGCCCCTGGGAAAACATCCCGCTGGTCAGCTACCTGGCGCTGGGCGGCAAATGCTCGTCCTGC AAGGCCGCCATCGGCAAACGCTACCCCCTGGTGGAACTGGCCACCGCGCTGCTTTCTGGCTACGTCGCCTGGCATTTCGGCTTCACCTGGCAGGCGGGCG CGATGCTCCTGCTGACCTGGGGTCTGCTGGCGATGAGCCTGATCGATGCCGATCACCAACTGCTGCCGGACGTGCTGGTGCTGCCGCTGCTCTGGCTGGG CCTGATCGCCAACCATTTCGGCCTCTTCGCCAGCCTCGGCGATGCGCTGTTCGGCGCGGTGTTCGGCTACCTGAGCCTGTGGTCGGTGTTCTGGCTGTTC AAGCTGGTGACCGGCAAGGAGGGCATGGGCTACGGCGACTTCAAGCTGCTGGCCATGCTCGGTGCCTGGGGCGGCTGGCAGATCCTGCCGCTGACCATCC TGCTGTCGTCGCTGGTCGGGGCGATCCTCGGGGTGATCATGCTGCGCCTGCGCAACGCCGAAAGCGGCACGCCGATCCCCTTCGGTCCCTATCTGGCGAT TGCCGGGTGGATTGCTTTGCTCTGGGGTGATCAAATAACCCGGACCTATCTGCAATTCGCCGGATTCAAATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCCAACCCTGGATACTAGGCCTCACGGGCGGTATCGGCAGCGGCAAGAGCGCAGCCGCCGAGCATTTCATTTCCCTCGGCGTCCACCTGGTGGACGCCGA CCATGCCGCCCGCTGGGTGGTGGAGCCGGGGCGTCCGGCCCTGGCGAAGATCGTCGAACGCTTCGGCGACGGCATCCTCCTGCCCGATGGCCAGCTCGAC CGCGCCGCCTTGCGCGAGCGGATCTTCCAGGCGCCGGAGGAACGGCGCTGGCTGGAGCAATTGCTGCACCCGCTGATCGGCGCGGAGATCGTCCAGTACC TGGCCAGGGCCGAATCGCCCTACGCCATCCTGGTCTCGCCGCTGCTGGTGGAGTCCGGCCAGCGCCAGATGACCCAGCGCGTGCTGGTGGTGGATACCCC GGAACATCTGCAACTACAGCGCACCATGCTTCGCGACAAGGTCTCCGAGGAGCAGGTGCGCTCGATCCTCCAGGCCCAGGCCCGGCGCGACGAGCGCTTG
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| Amino Acid Sequence |
>type 4 prepilin peptidase PilD
MELLDYLASHPLAFVLCAILLGLLVGSFLNVVVHRLPKMMERNWKAEAREALGLEPEPKQATYNLVLPNSACPRCGHEIRPWENIPLVSYLALGGKCSSC KAAIGKRYPLVELATALLSGYVAWHFGFTWQAGAMLLLTWGLLAMSLIDADHQLLPDVLVLPLLWLGLIANHFGLFASLGDALFGAVFGYLSLWSVFWLF KLVTGKEGMGYGDFKLLAMLGAWGGWQILPLTILLSSLVGAILGVIMLRLRNAESGTPIPFGPYLAIAGWIALLWGDQITRTYLQFAGFK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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