Pseudomonas aeruginosa UCBPP-PA14, PA14_58420 (dppA4)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa UCBPP-PA14 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CCTGACCCTGGCCTACCAGCAGGTCGACGGCAACGAATACTTCGACTACGTGCACGAAACCTCGGCGATCTTCCTGGCCAACTCGATGCTGGCCGACTAC AACAGCCCCAACGAGAAGTCCGCGCAGATCCGCTACGAGACCGACTGGAGCTACTACGGGGTCCCCGGCCTGAGCACCGGCGTGTGGTACGTGAAGGGCT GGGACATCGACGGCACCCACTACGACGGCGATCGCAACGGTGCCTACGGCAACTACGCCGAGGTGCGCGCCCAGGACGGCGAGAAGCACCACGAGCTGGG CCTGATGGCGGCCTACAAGGTGCAGAACGGGCCGATCAAGGACAGCACCTTCAAGCTCACCTACATGATGCACAAGGCCAGCCAGAACCAGGTCGACGGC AGCGTCAACGAACTGCGCCTGGTCAGCACCTTCCCCTTCAACCTGCTGTAAACCTGCGACAACCGGCGGCCCCGGCGACGGGGCCCACGAGGAGGACCCC
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| DNA Sequence for Gene |
>PA14_58420
|dppA4
ATGCTCCATCCGTTGCTCCGACACCTGCCCCTGGCCCTGGCCCTGGCGCTATGCGCCGCCGGCGCGGCCCAGGCGAAGAACCTGGTGGTCTGCACCGAGG CCAGCCCGGAAGGCTTCGACATCGTCCAGTACACCGGCGCGGTGACCGCCGACGCCTCCGCGGAAACCGTGTTCAACCGCCTGCTCGCCTTCCGCCCCGG CACCACCGAGGTGATCCCGGGGCTGGCCGAGCGCTGGGACGTCAGCGCCGACGGACTGAGCTATACCTTCCACCTGCGCCCCGGCGTGAAATTCCATACC ACCGACTACTTCAAGCCGACCCGGAGCCTGAATGCCGATGATGTGCTGTGGACCTTCCAGCGCGCCCTCGATCCGAAGCATCCCTGGCATGCCTCGGCGC TGCGCGGCTACGCCTACTTCGACGCGATGGGCATGGGCGAGCTGATCAAGTCGGTGGAAAAGGTCGACGAGCTCACCGTGCGCTTCGTCCTCAACCGTCC CGAAGCGCCGTTCCTGCGCGATATGGCGATGCCCTTCGCGTCCATCTATTCCGCCGAGTACGGCGACCAGTTGCTCGCCGCCGGCAAGCAGGGCCAGTTG AACAACCAGCCGATCGGCACCGGGCCGTTCGTCTTCAAGCGCTACGCCAAGGACGCCCAGGTCCGCTACACGGCGAACCCGGACTACTACGCCGGCAAGC CGCCGATCGACAATCTGGTGTTCGCCATTACCCTCGATCCCAACGTGCGCATGCAGAAGGTCCGTGCCGGCGAGTGCCAGGTCTCGCTGTACCCGAAACC GGAGGACGTGCCGCGCCTGAAGCAGGACCCGAACCTGGCGGTGGACGAGATCGATGCCCTGCTGACCACCTACATTGCCATCAACACCCAGCACAAGCCG CTCGACGACCCGCGCGTGCGCCAGGCGATCAACCTCGCTCTGGACAAGAAGGCCATGCTCGACGCGGTGTTCGGCCCCGGCGCGGCCAGTCCGGCTGTCG GTCCCTATCCCCCGACCCTGCTCGGCTACAACCATTCGATCCAGGACTGGCCGCACGATCCCGAACGCGCCAGGGCGCTGCTCAAGGAAGCCGGTGCGGA AAATCTCAGGATCACCCTGTTCATTCGCAACGGCACCTCGCCTACCATCCCCAACCCCGCCCTGGCAGCACAGATGCTGCAAGCAGACCTGGCCAAGGCC GGCATCCAGCTGACCATCCGTTCCCTGGAGTGGGGCGAGCTGCTCAAGCGTTCGAAGGCCGGCGAGCACGACCTGTCGCTGCTTGGCTGGGCCGGCGACA ACGGCGACCCGGACAACTTCCTCAGCCCGAACCTGAGCTGCGCCGCCGCCGAGTCGGGTGAAAACCAGGCGCGCTGGTGCGACAAGGACTTCGAGGCGCT GATGCGCAAGGCCCGCGAGGTGAGCGATCCGGCCGAGCGGGCGAAACTGTACGAGCAGGCCCAGGTGGTATTCCACGAACAGGCCCCATGGATACCGCTG GCCTACCCGAAGCTGTTCAACGTCCGGCGGAACACGGTGCAGGGCTACGTGATCAATCCGTTGAGCAACAACAACTTCGCCACCACCTCGGTGAAGCCCT AG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AAGAACAAGGACCACAGCCCTGCCGCCAGCGGGGCGCACGGTCCGCGATGAGGAGTTACCCGCCAACATGCTTAGTTTCATTGCACGACGATTGGGGTTG CTGATCCCCACCTTCTTCGGCGTGACGCTGCTCACCTTCGCGCTGATCCGCCTGATTCCCGGCGACCCGGTGGAAGTGATGATGGGCGAACGTCGCGTCG ATCCGCAGATGCATGCCGAGGCCCTGCACCGCCTGGGCCTGGACAAGCCCTTGTACCAGCAGTACCTGGACTACGTGGGCAACCTGGCACAGGGCAATCT CGGCGAGTCGCTGACCACCCGCGAAGGCGTCTGGCACGAATTCCTCACCCTGTTCCCGGCGACCCTGGAACTGTCCCTGGCCGCCATGCTCTTCGCCGGT ACCTTCGGCCTGCTGGCCGGGGTGATCGCCGCCCTGAAACGCGGTTCGCTGTTCGACCATGGGGTGATGACGGTGTCCCTCGCCGGCTATTCGATGCCGA
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| Amino Acid Sequence |
>dipeptide ABC transporter substrate-binding protein DppA4
MLHPLLRHLPLALALALCAAGAAQAKNLVVCTEASPEGFDIVQYTGAVTADASAETVFNRLLAFRPGTTEVIPGLAERWDVSADGLSYTFHLRPGVKFHT TDYFKPTRSLNADDVLWTFQRALDPKHPWHASALRGYAYFDAMGMGELIKSVEKVDELTVRFVLNRPEAPFLRDMAMPFASIYSAEYGDQLLAAGKQGQL NNQPIGTGPFVFKRYAKDAQVRYTANPDYYAGKPPIDNLVFAITLDPNVRMQKVRAGECQVSLYPKPEDVPRLKQDPNLAVDEIDALLTTYIAINTQHKP LDDPRVRQAINLALDKKAMLDAVFGPGAASPAVGPYPPTLLGYNHSIQDWPHDPERARALLKEAGAENLRITLFIRNGTSPTIPNPALAAQMLQADLAKA GIQLTIRSLEWGELLKRSKAGEHDLSLLGWAGDNGDPDNFLSPNLSCAAAESGENQARWCDKDFEALMRKAREVSDPAERAKLYEQAQVVFHEQAPWIPL AYPKLFNVRRNTVQGYVINPLSNNNFATTSVKP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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