Pseudomonas aeruginosa UCBPP-PA14, PA14_58250
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa UCBPP-PA14 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CACCAGCAGGACTGCGCCGGCCTGGTGCGCTTCGCCGCCAACGAGGCGCTGAAAGTCCACGATGGCAAGTGGCTGCGCGCCAACGGCCTGTCCAACCGCT ACCTGCCCCCGGAGCTGGCGCTCAGTCCCGAGCAACGGCGCCTGGCGCAGAACTGGCAGCAGGGTGGCGGCCAGGTCGGGCCCTACGTGAATGCGATCAA GCTGGTGCAGTTCAACAGTCGGCTGGTCGGCCGCGACCTCAACCAGGCGCGCCCCGGCGACCTGATGTTCTACGACCAGGGCGACGACCAGCACCTGATG ATCTGGATGGGCCGCTCCATCGCCTATCACACCGGCAGCAGCACCCCGACCGATAACGGCATGCGCTCGGTCAGCCTGCAACAACTCATGACATGGAAGG ACACCCGATGGATCCCCGACGAATCCAATCCCAACTTTATCGGCATCTATCGGCTGGCTTTCCTCTCTCAATGAATCGCGTCCCAGTGAAGACCACAGCA
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| DNA Sequence for Gene |
>PA14_58250
ATGAGCAACCTGCGCCGTTTCAGCCGTAGCCTGGCGGTCGCCGCCCTGGTCCTGCTGCCGTTCGCCGCCGTCCAGGCGGAAGACACGGTGGAACCGAGCG GCTACACGCCGATGGCCGGCGAATCCTTCTTCCTGCTCGCCGACAGCAGCTTCGCCACCGACGAGGAAGCGCGGGTCCGTCTCGAAGCGCCCGGCCGCGA CTACCGGCGCTACCGCATGGAGCCCTATGGCGGGGTCGACGTGCGCCTGTACCGGATCGAACAGCCGCTGGAGTTCCTCAAGCGGCAGAAGAACCTGCAC CGGGTCCTGGCCGAGGGACAGTTCAAGGGCGAAGGCCTGTCGAACACCCTGGCCTATCTCTGGGACAACTGGTATCGCAAGTCGCGCCGGGTGATGCAGC GCGCCTTCTCCTACGAGTCGCGGCAACAGGTCACCGAGGCGGTGCCCGAGCTGAAGATGGGCAACGCCATGACCGCGCCGACGCCCTACGACGCGCAGCC GCAATACGCGCCGATTCCCGGCCTGCCGCTGGTCAGCCAGTTCCGCTATCCGCTGTGGGACGCCAAGCCCATCGAGCCGCCGCAGGACGTCAAGCTGGCC GGTTCCTCCAGCGAGTTCATCAACGTCGTGCCGGGCAATGTCTACATCCCGCTGGGCAAGCTGAAGCCGGGCCTCTACCTGGTCGAGGCGCTGGTCGGCA AGTACCGCGCCACCACCGTGGTGTTCGTCTCCAACAGCGTGGCGGTGAGCAAGGTCGCCGGCGACGAGCTGCTGGTCTGGACCGCACGCAAGCACGAAGG CACCCCGGTGCCCGACACCAAGGTGCTGTGGACCGACGGCCTGGGCGTGATGAGCAGCGGCAATACCGACGCCGACGGCCTGCTGCGGCTCAAGCACGCC AGTCCGGAGCGCTCCTACGTGATCGGCGAGGACCGCGAGGGTGGGGTCTTCGTCTCCGAGAACTTCTATTACGACAGCGAGATCTACGACACCAAGATCT ACGCCTTCACCGACCGCCCGCTGTACCGGCCGGGCGACTGGGTCTCGTTGAAGATGGTCGGCCGCGAGTTCAAGGACGCCCGTCAATCCCAGGCCGCCGC CAGCGCGCCGGTGCGCCTGAGCGTGATCGACGCCAGCGGCACGGTATTGCAAAGCCTGGACCTCCGCTTCGACGCGAAGAGCGGCGCCAATGGCCGCTTC CAACTGCCGGAGAACGCCGTCGCCGGCGGCTACGAGTTGCGCTTCGACTACCGCGGGCAGACCTACAGCAGCGCCTTCCGCGTCGCCGAATACATCAAGC CGCACTTCGAAGTCTCCCTCGACCTGGCCAAGCCGGACTTCAAGACCGCCGAGCCGGTGAAGGGCGAGATCGTCCTGCTCTATCCGGACGGCAAGCCGGT GGCCAACGCGCGCCTGCAACTGAGCCTGCGCGCCCAGCAGTTGTCGATGGTGGACAACGAACTGCAGTATCTCGGCCAGTTCCCGGTGGAACTGAGCAGC ACCGAACTGACCACCGACGGCAAGGGCCGCGCCGCCATCGAATTGCCGCCGGCCGAGAAACCCAGTCGCTACATGCTGACCATCTTCGCCAGCGACGGCG CCGCCTACCGGGTCAAGACTAGCAAGGAGATCCTCATCGAGCGCGGTGCCGCGCGCTACCGCCTGAGCGCGCCGCAGCGCTTCAGCGCCGCCGGCGAGAA GGTCGAGTTCAGCTATGCCAGCGAACAGCCGACCCCGCTCAAGCCGAGCAGCTACCAGTGGATCCGCCTGGAGGACCGCGCCACCGACAGCGGTCCGGTC GCCGACGGCCGCTTCGCGCTGGCCTTCGAGCGTCCCGGTACCTATTCCGTGGAGCTGCGCGACGACAAGGGCCAGCTCCTTGGCGCCACCGGCCACTCGG TGAGCGGCGAGGGCGTGAAGTCGGTGCCTGGCACCGTCGAGGTGGTGTTCGACAAGCCCGAGTACCGCACCGGCGAGGAAGCCTCCGCACTGATCACCTT CCCCGAGCCGGTGGAGGATGCGCTGTTGTCCCTGGAGCGCGACAAGGTCGAGGCCACCGCCCTGCTGTCAAAGGGCGCCGACTGGCTGCGCCTGGAAAAG CTCAATCCGACCCAGTACCGCGTGCGGATCCCGGTGCGCGAGGAGTTCTCGCCGAACCTGACCTTCTCGGTGCTCTACACCAAGGGCGGCGACTACAGCT TCCAGAACGCCGGGATCAAGGTCGGCATGCCCCAGGTGGAGATCGACATCGCCACCGACAAGGAGCGCTACGAACCCGGCGAGACGGTGACCGTGACCCT GGCCACGCGCTTCGCCGGCAAACCGGCTTCCAGTCACCTGACCGTCAGCGTGGTGGATGAGATGGTCTATGCCCTGCAGGCGGAGATCGCCCCCGGTATC GACCAGTTCTTCTACCATCCACGGCGCAACAACGTGCGCACCAGCGCCAGCCTGGCCTTCATCAGCTACGACGTGGCGTTGCCCGGCAGCACCAGCGCAC CCGGACGGGCGAACCGCAGCGAGCGCGGCGTCAAGGTACTGGAGCGGCCGCGCCGCGAGGACGTCGACACCGCCGCCTGGCAGCCGGAGCTGGTCACCGA CGCCCAGGGCAAGGCCAGCTTCAGCTTCCGCATGCCCGACTCGCTGACCCGCTGGCGGATCACCGCACGGGCCATCGACGACAACGGCCAGGTCGGCCAG AAGAAGCAGTTCCTTCGCTCGGAGAAGCCGCTGTACCTGAAATGGAGCGGGCCGACCCGCTTCCGCCAGGGTGACCAGCCCGACCTCGGCCTGTTCGTCT TCAACCAGGGCGAACAGCCGGTCAAGGCCGAGCTGCTCAGCGGGCCGCCTGGCAGCCAGCGCAGCCAGACCCTGGAGCTGGCCAAGGGAGTCAACTACAT TCCGCTGGCGCAACAGCCGCTCAGCGATGGCGACTGGAGCGCCGAGCTGCGCCAGGACGGGCAGGTCCGCGACCGCCTGGCGGTGCGCTTCAACCTGCTG GCCGACGGCTGGCAGGTGGAGCAGGCGCAGAACCTCAGCCTGGCGGCGGCGAGCAACCCGCTGCAACTGCCGGCGGACGCCCGCGACGTACGCCTGCGCC TGGCCGATGGCCCGGCCGCGGCCTACCTGGGCAATCTCGATGATCTGCTGGAGTATCCCTACGGCGGCGTCGAGCAGACCGCCAGCCAACTGCTGCCGCT GAGCATCGCCTATCCGGCGCTGGCCGGCGGCGAGCCGCGGATTCGCGACCGCCTGCGCCTGATCATGCAGAACAGTCGCCTGCGCCTGGTGCAGATGGCC GGCCCGGACGCCTGGTTCGCCTGGTGGGGCGGCGACGTCGATGGCGACGCTTTCCTCACCGCCTACGCCTACTACGCCGATTGGTACGCCAGCCGCGCAC TGGAGATCCAACTGCCGGCCGAACACTGGCAGCGTATCCTCGAGCCCTACGCCAAGCAGGCGACGCAGACCCCGCTGCTGCAGCGCGCGCTGATCCTGGC TTTCGCCCGCGACATGCAGTTGCCGGTGAACACCCTGCTCGGCGGCCTGCTCAACGATCTGGCCAACGCCGGCGAAGGGCAGGCGCGCGCGGAGCCGCTG GAGGCCGACGACGGCCTGGTGCTGGGCGACCCGGACTCGGCCGTCGGCCTGGCCGCGGCGCGAGTGCTGGCGGTGGACCTGGCACGGCAACTGCGGGTTG CGGTGCCCGCGCCGCTGGCCGCCCAGGCCGAGACGGCGACGCAGCGCCTGCGTGAGGCCGGCTTGCCGTTCACCGATGCCTTGCTGGCCTCTCGCTCGGC CGTGGACGGCCAGCAGGCCAGCGCTCTGCTGCAACGCCTGGCGCCGGCGCAATCGACCCTGGAACGCGCCCTGGCCCTGACCTGGCTGCAGGGCGCCCTG GCCCAGGCGCCGCAGGGCAAGCTGCCGCAGCCGCCGAAGGACTGGCAGGCGCAGCGCGGCGCCACCGGCGAAACCTACTGGCAATGGCGCGGCCGCGGCA TTCCGAGCTGGATCGACCTGGACGAGGCGCCGGCCCGGCCGTTGCCGGTTGCGCTCAGCTACCGCAGCGCCCAGGCGCCGAGCGGGCAACTGCCGGTGCA GATCAGCCGTCGCCTGCTGCGCCTGGTGCCCGGCGAGGGGGCGTTCGAGTTCAAGGTCGAGGAGGTCGGCGACAAGCCGCTTTCCAGCGACGAACTGTAT CTCGACGAAGTGACCCTGACCGTTCCGGAAGACACCGCTCTACGCTACGGCATGCTGGAACTGCCGCTGCCGCCCGGTGCGGATGTCGAGCGCACCACCT GGGGCATCAAGATCAGCGGCCTGGCCGGCGACGAGGCGACCACCCTGGAGCGCGCGCGCAACGAACCGGGTGAGCTGTTCTACGGAGTGCCGGTGGACAG CCTGAGTGGCGAGCAGCGTTTCCGTCACCTGGTGCGTTTCTCCCAGAAAGGCAGCTTCAACCTGCCACCGGCCCGCTACCTGCGTCTCTACGCGCCGGAA CAGCAGGCCCTGGAAGCCAAGCCGGCGCTGGCCAAGGTCAAGGTCGAGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TTGCGTTGCGCGCCTGGCTGGTCCTGCTGTGCGCCGTGCCGTTGCTGCTTCGCGCAGCGGAGGCGCCGGTCCAGCTGGCCTGGCGCACGACCCAGGGCTA CGAACTGGTGAGCCTGGATCGCCAGCGGGTGCTCGAGCGCCGGCCGTTGCCGGCCGATTTGCAGGCTCCGCTGGGCAGCCTGTGGAAACTGTTCGTCTTC GCCTGGCTGAGCGACACCGGCCAGGCCGAGTCGCCCTATGCCTGCCAGGGGCGCAGCCGCGAGGAGGTCTACTGCTGCGAGAATGGCCAGACGATCGGTC GTGACCGCGCCCTGGTGCGCTCCTGCGGGCTGTATTTCGAGCCGCAGCGCCTCGCCTTGCGGCCGGAGGCCTGGCGCGACTACTGGCAGGCGCGCCGGGC ACCGGCCTGGTTGCTCGATCTGGAACGGCTGCAACCGCAGACGCGGGTGCCGGTTAAGGAGCTTCTGGAACAGTTGCAGCAACTGCCGGCCCAGGGCGAG
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| Amino Acid Sequence |
>hypothetical protein
MSNLRRFSRSLAVAALVLLPFAAVQAEDTVEPSGYTPMAGESFFLLADSSFATDEEARVRLEAPGRDYRRYRMEPYGGVDVRLYRIEQPLEFLKRQKNLH RVLAEGQFKGEGLSNTLAYLWDNWYRKSRRVMQRAFSYESRQQVTEAVPELKMGNAMTAPTPYDAQPQYAPIPGLPLVSQFRYPLWDAKPIEPPQDVKLA GSSSEFINVVPGNVYIPLGKLKPGLYLVEALVGKYRATTVVFVSNSVAVSKVAGDELLVWTARKHEGTPVPDTKVLWTDGLGVMSSGNTDADGLLRLKHA SPERSYVIGEDREGGVFVSENFYYDSEIYDTKIYAFTDRPLYRPGDWVSLKMVGREFKDARQSQAAASAPVRLSVIDASGTVLQSLDLRFDAKSGANGRF QLPENAVAGGYELRFDYRGQTYSSAFRVAEYIKPHFEVSLDLAKPDFKTAEPVKGEIVLLYPDGKPVANARLQLSLRAQQLSMVDNELQYLGQFPVELSS TELTTDGKGRAAIELPPAEKPSRYMLTIFASDGAAYRVKTSKEILIERGAARYRLSAPQRFSAAGEKVEFSYASEQPTPLKPSSYQWIRLEDRATDSGPV ADGRFALAFERPGTYSVELRDDKGQLLGATGHSVSGEGVKSVPGTVEVVFDKPEYRTGEEASALITFPEPVEDALLSLERDKVEATALLSKGADWLRLEK LNPTQYRVRIPVREEFSPNLTFSVLYTKGGDYSFQNAGIKVGMPQVEIDIATDKERYEPGETVTVTLATRFAGKPASSHLTVSVVDEMVYALQAEIAPGI DQFFYHPRRNNVRTSASLAFISYDVALPGSTSAPGRANRSERGVKVLERPRREDVDTAAWQPELVTDAQGKASFSFRMPDSLTRWRITARAIDDNGQVGQ KKQFLRSEKPLYLKWSGPTRFRQGDQPDLGLFVFNQGEQPVKAELLSGPPGSQRSQTLELAKGVNYIPLAQQPLSDGDWSAELRQDGQVRDRLAVRFNLL ADGWQVEQAQNLSLAAASNPLQLPADARDVRLRLADGPAAAYLGNLDDLLEYPYGGVEQTASQLLPLSIAYPALAGGEPRIRDRLRLIMQNSRLRLVQMA GPDAWFAWWGGDVDGDAFLTAYAYYADWYASRALEIQLPAEHWQRILEPYAKQATQTPLLQRALILAFARDMQLPVNTLLGGLLNDLANAGEGQARAEPL EADDGLVLGDPDSAVGLAAARVLAVDLARQLRVAVPAPLAAQAETATQRLREAGLPFTDALLASRSAVDGQQASALLQRLAPAQSTLERALALTWLQGAL AQAPQGKLPQPPKDWQAQRGATGETYWQWRGRGIPSWIDLDEAPARPLPVALSYRSAQAPSGQLPVQISRRLLRLVPGEGAFEFKVEEVGDKPLSSDELY LDEVTLTVPEDTALRYGMLELPLPPGADVERTTWGIKISGLAGDEATTLERARNEPGELFYGVPVDSLSGEQRFRHLVRFSQKGSFNLPPARYLRLYAPE QQALEAKPALAKVKVE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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