Pseudomonas lutea DSM 17257, LT42_RS02335
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas lutea strain DSM 17257 Contig001, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CATCAATCAGCAGGCGGGTGGTGAAATCGGGTTGGGCAGTCGTCATGGGCAGCGCTCCTTGAAAGTGCGCGGGAGTCTGCGCCAGGGTGGGTTTGGGCGC AATGACGCCGCTTGCACTCGTTCCTCCCGCCTGCACTTCAGGCGGACCTGCCGGCAACTGATCGGTCGTCGCGGCAGGGTTGGTTATGTACCTCTGTCGA GAAAGCGGCTGTATGGCCAATCAATGTTCAGCGGCTGAAGTGCCGTCTTCGCGAGCAAGGTGGAGCGCCACCCCGGTCACCCCAACAGGGACGGTGTTCA CTGCGTGGCAAGGAAGCCTGGACGCCGGCGTGGTTCACCGTGGTCTCTGGAACTGTCCCTGTCGGAAGTCGACTTTAATCCGCCACCTACCTGTCGCGAA CAGGACAGATTGCGCGCACTCGAATAAACGCAGGTCGCTGCCGTCGCATGACCAAAGCTTCGGCGGATGTAATCTGGAATGACACACTGGGAGACTTTCA
|
|
| DNA Sequence for Gene |
>LT42_RS02335
ATGACTCGACGCGCTTGCCTGGCTGCTCTATTGGTACTGACTGCATCAACGGCGTTCGGCGCCCCGGTTTACGATCATCTTTATGCTTTCGGTGACAGCT ACTCTGACAATGGTGCAGGTGAAAACTTCACCCGAACATTGGCCTCCCGGAAGGTCAAGGATGCGCTGGAGTTACCCGGCTCCTTATATTGGAGGGGACG CTGGAGCAACGGTCCCACTGCGGTAGAACATTTGGCCGAAGCCTTGAAAACACCCTTGACCGACTACGCAATTGGCGGCGCAAAAAGCGGTAACGGCAAC TACTACTCCTGGATGGAACCTTCCCGCAACACTGGAGTTTTCGGTCAGATCGCTGATCATCTGAAAGCCGCCGAGGCACACAAAGCGGACCCGAATGCGC TCTATTTCATTTTCACCTCGGCCAATGACTTTTTTGAATGGGCGGACTTCTCGCGGACAGAGTCGATAGACGCGCTTGCCCAGACAAGCGTGGCGAACAT ACAGAAGGCCACCGCGTCGCTGATTGAAGCAGGCGCGAAGCACGTGATGGTGGTGGGAACTACGGATTTAAGTCATGTGCCGGCTGTGGTCCAGGGCAAT CAAGCGACGAGTGCGAAGGCATACCAGGAAATACTCGAACAGAAACTTCCAGCGGCGCTGAAGACACTGGCTAAAACTCGTCACGTCGCCATCAGCTACT TCGACCATCTGGCCTTTAGCAACACGCTCCGAGCCGCACCTGATGTTGCGGGGTTCAAGGAGCTCGATGCCCCATGTCAGGTCACCTATCCGGACGCCGG GCCCGTGTGTGAAACCCCTGACACTCATTACTACTGGGATGAATGGCACCCGACTCGAAAAGTTCACAGCCTGGCCGCGGTCGCCATGCTCAAAACACTG GACGCCAGCCGTTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
ATTTCGCTGTGAGATCAGCTCCGGTATGCGCGTTATTGATCCCCTGCCTGCCAACAGAGCCAGCATCCAAGGTCGCTCCCGAGCCCGTCGGGGCGAGCCT GCTCGCGAATGTTTCTTCTCAGTCTGCATAGGCAGTGGCCGAATTCCTCGAGCCGTTCATGAGCGCGCCCTCTTCCATTTGGGTGGTTGCAGGAGCCTGA CACAGGCGGCTCTGAATAGATCGACACGACCACCGGTCAGGTCCGCTGCGCTGGCCAAAATCCCGAAGTATAGGGTCACCAATTATCCCTATATATGGGA CGACGAATCACATATTGAGGTATCCGCACAGGTCGTCTAAGGTGGGGCTTCTTCGCATTCCATAAAAACAACAGGAAGTCCCATGCCCCAGCCATTTCTG GATTCGGGCCTGCACGCCAGCACGATGAAGCGGCTCAACCTCAAGTTGATTCCGTTTCTGATGCTGCTGTACATGGTCGCGTACATCGACAAGTCGAACA
|
|
| Amino Acid Sequence |
>GDSL family lipase
MTRRACLAALLVLTASTAFGAPVYDHLYAFGDSYSDNGAGENFTRTLASRKVKDALELPGSLYWRGRWSNGPTAVEHLAEALKTPLTDYAIGGAKSGNGN YYSWMEPSRNTGVFGQIADHLKAAEAHKADPNALYFIFTSANDFFEWADFSRTESIDALAQTSVANIQKATASLIEAGAKHVMVVGTTDLSHVPAVVQGN QATSAKAYQEILEQKLPAALKTLAKTRHVAISYFDHLAFSNTLRAAPDVAGFKELDAPCQVTYPDAGPVCETPDTHYYWDEWHPTRKVHSLAAVAMLKTL DASR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|