Pseudomonas lutea DSM 17257, LT42_RS02025

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas lutea strain DSM 17257 Contig001, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TTGCTGAGGCTGAGTGTCGCCGGGCTGCAGCAGATTCTGCACACGCGCAGCGAACTCAAAAACGAACTGCGCCTGTCGCAGACCACGGTGCAGGGCGCAC AAGGCAACCCGCTGAAATCGGCCGTTGATGCGCCACAAGCCCTGGCGGCATTGTTGACCTCCCACAAACCCGGCCAACTGCCGGGCGAGCAGGCGGTGTC GCAGGCCTGCAACGACGTGCAGGCGCATCAGGTGGCGTTGATGGCGGCCAGCCGCGCCGCCGTTCGCGCCACCCTGGAGCACTTCTCGCCGGAACAGCTG ATCCTGCGCTTCGAGCGCGACAAACCGCCGTTGTTCCCGACCTCAGGCAGTCGATGGAGGGCCTACGGCCGCTATCACCAGGCCCTGCGTCAGGACAACG ACTGGAGCGAGCGTCTGATGGCGCGCGACTTCGCTCAGGCTTATGAAGAGCAGATCCGATTGATCGCCACCCTCCGCAGTGGCCACCAGGGATGAAACAC
DNA Sequence for Gene
>LT42_RS02025
ATGTTTTGTCGTTCCACTCGCGTCTCAGGCGCGCTGACTGCATTGGCCGTGTGTGTGCTGCTGGCAGGCTGCTCGACGCTGTCTCCCTATTCACGACTGA CCAAGCTCGACCTCCGGCTCACTGCCAGCGATCAACTGAATCCTGATCTGAACGGGCGCCCGTCGCCCATCGTGTTACGGCTCTACGAGCTCAACCACGC GGTCGCTTTCGAAAATGCCGATTTTTTCAGTCTTTATGAGCGGGCCAAAGAAACCCTCGCGCCCGACATGGTCGCCAGCGAGGAGCTAGAGCTACGCCCG GGCGAGACGCTTGAACTGAAGCTCAGCGTACACCGGGGCAGTCGCTATGTCGGTGTGGTCGCGGCCTATCGCGACCTGTCCCAAACCGTGTGGCGCTCAA CGCATCGTGTTGCAGCGACCGATACGACGGAGATCGATCTCACCCTTGATCAAAGTGGCATTCGCCTTTCACGAGAAGCGCTGGCCGAGGCGGAAAACCC ATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ACGCCCACAAAGTCATCTGGCAGGAGGGCATGTTGCTGCGCCCGCAGCACTTGCAGCACAACGATCGTTACCACGATTACCAGATAAAAACCCGCACCCG ATTAATGGGCGGCTATGTCTGGGGCTTTATCACTTTGGACATCGACGTGCAGTTTCTCCATATGGGCAAACTGGTGATCAGCCGGGCGTCCGGCGTCCTG CCCGACGGCAGCCTGTTCGACCTGGGCGGCAGCAAGGAGTCCCTGGCCCTGGACGTTCCGCCCAATACCGCCGACACGCCTGTTTATCTGGCGCTGCCGT TGGTCACTGGCAATCATGTCGAGTCACGCCGGGGTGAGCAGACTGATGTTCTGGCGCGCTACATCGCGTATGAAACCCAGGTCGCCGATTCGAACGCCGG TGATGACGCGGTGTGCCAGGTCAGCTGTGGTCGCCCCGACTTCAGGCTGCTGCTCGGTGAACAGCAAAGCTACCAGGCGTTCGTGAGGCTGAAAATCTGT
Amino Acid Sequence
>type VI secretion protein
MFCRSTRVSGALTALAVCVLLAGCSTLSPYSRLTKLDLRLTASDQLNPDLNGRPSPIVLRLYELNHAVAFENADFFSLYERAKETLAPDMVASEELELRP GETLELKLSVHRGSRYVGVVAAYRDLSQTVWRSTHRVAATDTTEIDLTLDQSGIRLSREALAEAENP
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site