Pseudomonas lutea DSM 17257, LT42_RS01555
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas lutea strain DSM 17257 Contig001, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGCCCCCGAGAATGTCGGCCATCATTGAGGTGTGCGACAACGCATCGCCCACCCGAGCGGCCCAGAGTGCGTCAGACATTCCTTGTCCTGCTATTTGAGA AACGGCGTAATCTAAACGCTTTGAGCTGCGTTGTCTGAACTCAGAAACAAAAAAGGAGCAGGGTCGGCGCTTTTCAGAAGTGGACTACAACACTGTGCCT TCATTTCTACGGATTGGAAAAAGATGCTTGATGAACTCGGCATCTTCCGGTTCGCTGGCCAGCCGGTCCACTGGGCAAAAACGGCCAGGGCGATCAGCAC GACCACATCGTCGCGATCATGGCCGGCCATGATCGCGCAGCATTCGCTGGAAGACACGGTTAGTTCGTTCCCGGCGGGGAGGGCGGGGCCGCCAGTCCTT GCATTGCCACGATTGTGCGGCCCGTCAAGCACCGACGCTGGAGCCGCGCAGGCCGCGCCTGTTAAGATTCGCGGCTTGTTCGACCTATCCGGGATTTTCC
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| DNA Sequence for Gene |
>LT42_RS01555
ATGACCACCGTCCGCACCCGCATCGCGCCATCGCCCACCGGCGACCCTCACGTTGGCACGGCCTACATCGCGCTGTTCAATTATTGCTTCGCCAAACAGC ACGGCGGCGAATTCATCCTGCGCATCGAAGACACCGATCAACTGCGCTCGACCCGCGAGTCGGAACAACAGATTTTCGACGCCTTGCGCTGGCTCGGCAT CGAGTGGAGCGAGGGGCCTGACGTCGGCGGCCCCCACGGCCCGTATCGCCAGAGCGAACGCGGCGATATCTACAAACAATACGTGCAGCAACTGGTTGAT GCCGGCCATGCCTTCCCGTGCTTCTGCACCGCCGAAGAGCTTGACCAGATGCGCGCCGAGCAGATGGCCCGTGGTGAAACCCCGCGTTATGACGGCCGCG CGCTGCTGCTTCCCAAAGAAGAAGTCGAGCGTCGCCTGGCTGCAGGCGAGCCCCATGTGATCCGCATGAAGGTGCCGAGTGAAGGCGTGTGCGTGGTGCC GGACATGCTGCGCGGCGACGTCGAAATCCCGTGGGACCGCATGGACATGCAGGTCCTGATGAAAACCGACGGACTGCCGACCTACTTCCTGGCCAACGTC GTCGACGACCATCTGATGGGCATCACCCACGTCCTGCGCGGCGAAGAGTGGCTGCCGTCGGCGCCCAAGTTGATTCTCCTGTATGAATACTTCGGCTGGG AAAAGCCGGCGCTGTGCTACATGCCGCTGCTGCGCAATCCCGACAAGAGCAAGCTCTCCAAGCGCAAGAATCCGACTTCGGTGACGTTCTACGAGCGCAT GGGCTTCATGCCCGAGGCCATGCTCAACTACCTTGGCCGCATGGGCTGGTCGATGCCTGACGAGCGCGAGAAGTTCTCGCTGGACGAAATGGTCGAGCAC TTCGACCTGAGCCGTGTGTCGCTGGGCGGGCCGATTTTCGACATCGAGAAGCTGTCGTGGCTCAACGGCCAATGGCTGCGTGAGCTGCCGGTGGAGGAGT TCGCCAGCCGCGTGCAGACCTGGGCGTTCAACAGTGACTACATGATGAAGATCGCGCCCCATGTGCAGGGCCGCGTCGAAACCTTCAGCCAGATCGCGCC GCTGGGCGGCTTCTTCTTTGCTGGCGCTGTGACCCCGGACGCCAAGTTGTTCGAGCACAAGAAGCTTTCGCCAGAGCAGGTGCGTCAGGTCATTCAGCTG ATCCTGTGGAAGCTCGAATCGCTGCGTCAGTGGGAAAAGGACAGGATCACAGGTTGCATTCAGGCGGTGGTCGAGCACCTGGAGCTCAAGCTGCGCGACG CCATGCCATTGATGTTCGCGGCCATCACTGGTCAGGCGAACTCGGTATCGGTCACTGACGCGATGGAGATTCTGGGCCCGGACCTGACCCGCTTCCGTCT GCGCCAGGCGCTGGACATGCTCGGCGGCGTGTCGAAAAAAGAGAACAAAGAGTGGGAGAAAGTGCTCGGCGCCATTGGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCGAGCCGTGGCCGCTGCGCAAGTTGCAGTGGCCGATCTTCGGGGGCATTTTCCGGGTGGCGGTAAGTGATTGTTATCCCGGAAAATTCTTTTGGAATTG TTTTAAAAAGAGTTTGACAGCTTTCCGGGTCGCACTTAATATGCGCCCCGTCCACACGGCAACGCAGAAACACGCGGTAACGCGGCGTCATCTGCAAGTG TATTGTGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCATGGCATGCAGGAGGTCAGCGGTTCGATCCCGCTTAGCTCCACCAAATTAGAAGCTTCAAGGT ATGCGTCACCGCCTCGAAGCTTGTACTGCTTCGGAACCAGCACCGATTCAGTACGCAAGGGTTACGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTT TCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCAGTTTTACCGAGTGATGCGCTGTTTAGGCTGATCTCCGCCGAGAGGCGTAAATCCGGGGC
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| Amino Acid Sequence |
>glutamyl-tRNA synthetase
MTTVRTRIAPSPTGDPHVGTAYIALFNYCFAKQHGGEFILRIEDTDQLRSTRESEQQIFDALRWLGIEWSEGPDVGGPHGPYRQSERGDIYKQYVQQLVD AGHAFPCFCTAEELDQMRAEQMARGETPRYDGRALLLPKEEVERRLAAGEPHVIRMKVPSEGVCVVPDMLRGDVEIPWDRMDMQVLMKTDGLPTYFLANV VDDHLMGITHVLRGEEWLPSAPKLILLYEYFGWEKPALCYMPLLRNPDKSKLSKRKNPTSVTFYERMGFMPEAMLNYLGRMGWSMPDEREKFSLDEMVEH FDLSRVSLGGPIFDIEKLSWLNGQWLRELPVEEFASRVQTWAFNSDYMMKIAPHVQGRVETFSQIAPLGGFFFAGAVTPDAKLFEHKKLSPEQVRQVIQL ILWKLESLRQWEKDRITGCIQAVVEHLELKLRDAMPLMFAAITGQANSVSVTDAMEILGPDLTRFRLRQALDMLGGVSKKENKEWEKVLGAIG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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