Pseudomonas lutea DSM 17257, LT42_RS00065
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas lutea strain DSM 17257 Contig001, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCTTGCCCACGGTCTGTCGGCAGCTGCGCTGTTTATCCTCAGCGGCCAGTTGTATGAGCGCCTGCACACTCGCGACATGCGTGAAATGGGCGGCTTGTGG AGCAAGATCGCTTATCTGCCTGCCATCAGCCTGTTCTTCGCTGCGGCGTCTCTGGGCTTGCCAGGCACCGGTAACTTTGTCGGTGAGTTCCTGATCCTTA TCGGCAGCTTTGTCAGCGCCCCGTGGATCACCGCCATCGCCACCACTGGTCTGGTATTCGGCTCGGTTTACTCGCTGATCATGATCCATCGCGCCTACTT CGGCCCGGCCAAATCGGACGCGGTCTACAACGGCATGGACAATCGGGAACTGATCATGGTGCTGGGTCTGGCGGTGCTGTTGGTGCTGCTGGGCGTTTAC CCGCAGCCGATCCTCGACACCTCTTCGGCGACCATGCATGGCGTGCAGCAATGGCTCGGCACCGCCTTCACTCAACTCGCTTCGGCCCGGTAAGAGCGCT
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| DNA Sequence for Gene |
>LT42_RS00065
ATGGACCTGACGATTCAACACTTTATTGCGCTGGCGCCGCTGCTGATTACCAGCATCACCATTGTGGTGGTGATGCTGGGCATCGCATGGCGTCGCAATC ACTCGCAATCATTCCTGCTGACAGTAGCGGGACTCAACCTGGCTTTGCTGTCGATCTACCCGGCGCTGAAAGTTGCGCCACTGGTGGTTACGCCATTGCT GCAGATCGACAGCTTTGCCTGCCTGTACATGGGCATCATTCTGGTGTCGACACTGGCCTGCGTTACCTTGGCTCACGCCTATCTGGGTGAAGGCAAGGCG GGCTATCCGGGCAACCGCGAAGAGCTTTACCTGCTGATCCTGATGGCTGCGGCCGGTGGGCTGGTGCTGGTCGCCGCGCAACACCTGGCAAGCCTGTTCA TCGGTCTGGAACTGCTATCGGTGCCGGTCTACGGTCTGGTCGCCTACGCCTTCTTCAACAAGCGCTCGCTGGAAGGCGGCATCAAGTACATGGTGCTCTC GGCCGCCGGCTCGGCGTTCCTGCTGTTCGGTATGGCGCTGCTGTATGCCGAATCCGGCAGCCTGGGCTTCAGTGAAATCGGCAAGGCCATCGCGGCCACC GGTATGCCAAGCCCGATCGCAAGCCTGGGGCTGGGCATGATGCTGGTAGGGTTGGGTTTCAAGCTGTCGCTGGTGCCGTTCCACTTGTGGACACCGGACG TGTACGAAGGCGCCCCTGCCCCTGTGGCAGCGTTCCTCGCTACGGCCAGTAAAGTGGCGGTGTTCGGCGTGCTGGTTCGCCTGTTCCAGATCTCCCCTGC GGCCACCAGCGGTGTGCTGACGGATGTGATGTCGGTCATTGCCGTGGCGTCGATCATCGTTGGTAACCTGCTGGCACTGACGCAGAACAACCTCAAGCGG CTACTCGGTTACTCGTCCATCGCGCACTTCGGCTATCTGATGATTGCGATGGTCGCGAGCAAAGGCATGGCAGTCGAGGCGATCAACGTCTACCTGGTGA CTTACGTACTGACCAGCCTGGGCGCATTCGGTGTGGTAACGCTGATGTCCTCGCCTTACAGCGGCCGTGACGCCGACGCGATGTTTGAATATCGCGGTCT GTTCTGGCGTCGTCCGTACCTGACGGCGGTGCTGACCGTGATGATGCTGTCGCTGGCAGGTATTCCGCTGACGACGGGCTTCATCGGCAAGTTCTACATC ATCGCGACCGGCGTCGAAGCGCACCTGTGGTGGTTGACCGGTACGCTGGTCGTGGGCAGTGCCATCGGCCTGTTCTACTACCTGCGGGTGATGGTGACCC TGTACCTGCAAGACTCCAAGATCCAGCGCCATGACGCGCCGTTCAACTGGGCCCAGCGTGCAGGCGGTGTAATGCTGTTGGGGATTACGCTGCTGGCGTT CTTCCTGGGCGTCTACCCGCAGCCGCTGCTGACCCTGGTGGGCCATGCTGGTTTGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TGGTTGAGTGATGCACAAAAAACCCTGCCTTCGAGCAGGGTTTTTTATGGCTTTGATTTAGTAGGTCTCTATAACGGCAGGCGCCCTTGATCTTGACCCA GCGCCCCCATGGCCTCTAAAGAATCAACCGGGCAATCGAACTGTCTTTTTGTCACCGGTAAACAACGCCCATGTCGACATGAACAACGCCGCTACCATCG GCCCGATCACAAAACCGTTCAGCCCGAACACCGCCATGCCCCCCAGTGTCGAGATCAGTATCAGATAATCCGGCATCCGCGTGTCCTTGCCGACCAGGAT CGGACGCAACACGTTGTCCACCAGCCCGATCACGAATACGCCGAACAACCCCAGCACCACGCCCTGCCAGATCATCCCGCTGAGCAGGAAGTACAAAGCG ACCGGTGCCCATACAATCCCCGCTCCTACCGCCGGCAGCAGCGACAGAAAGGCCATCATCACCGCCCACAAGAGTGCGCTGGGGATGTCCAGAATCCAGA
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| Amino Acid Sequence |
>NADH:ubiquinone oxidoreductase subunit N
MDLTIQHFIALAPLLITSITIVVVMLGIAWRRNHSQSFLLTVAGLNLALLSIYPALKVAPLVVTPLLQIDSFACLYMGIILVSTLACVTLAHAYLGEGKA GYPGNREELYLLILMAAAGGLVLVAAQHLASLFIGLELLSVPVYGLVAYAFFNKRSLEGGIKYMVLSAAGSAFLLFGMALLYAESGSLGFSEIGKAIAAT GMPSPIASLGLGMMLVGLGFKLSLVPFHLWTPDVYEGAPAPVAAFLATASKVAVFGVLVRLFQISPAATSGVLTDVMSVIAVASIIVGNLLALTQNNLKR LLGYSSIAHFGYLMIAMVASKGMAVEAINVYLVTYVLTSLGAFGVVTLMSSPYSGRDADAMFEYRGLFWRRPYLTAVLTVMMLSLAGIPLTTGFIGKFYI IATGVEAHLWWLTGTLVVGSAIGLFYYLRVMVTLYLQDSKIQRHDAPFNWAQRAGGVMLLGITLLAFFLGVYPQPLLTLVGHAGL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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