Pseudomonas mendocina EGD-AQ5, O203_RS43935

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas mendocina EGD-AQ5 contig5, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TGCAGCCTTGGCGCTTTGTGCGCGTCAGTGACCCGCAACTGCGTGAGTCCATTCATGAGCTGGTAGAGGCCGAGCGGGTGCGCACTGCCGAGGCCCTCGG CGAGCGCAGTGACGAGTTCATGCGGCTGAAGGTCGAAGGTATTCGCGACTGCGCCGAGCTGCTGGCGGTGGCGCTGATGGAGGGACGCGACGCACATGTC TTTGGACGACGCACCCTGCCGGAAATGGATATGGCCTCGGTGGCCTGCGCCATTCAGAATCTGTGGCTGGCTGCGCGTGCCGAAGGGCTCGGGCTCGGTT GGGTATCGTTGTTCGACCCCGAGGCGCTGGCCGCGTTGTTGGGCATGCCGGCGGGTAGCAAGCCGGTAGCGCTGCTGTGCCTGGGGCCGGTTCAGGCCTT TTACGAAAAGCCGATGCTGGTGGAGGAGGGTTGGGCCACGCCCCGACCGTTATCGGAATTGTTGTTCGAGAATCGATGGGGATCCTCTGGTGAGTGAACG
DNA Sequence for Gene
>O203_RS43935
ATGAGCCTGGCGCTGATTACCTGTGCCGGCGTGGCGTTGGATGCCGTGCTGGGCGAGCCCAGGCGCGCGCATCCGCTGGTGGCCTTCGGCCGCCTGGCGG GGCGCCTGGAGCAGCGCTTCAACCCGGCCGGTGGCGGCTGGCGCAGCCATGGCGTAACGGCCTGGTGCCTGGCGGTGCTGCCGTTGACCCTGCTTACCTG GCTGTTGGTGCACCTGACCTCGCTTGGCTGGGCGGTGGAGATCTTCGCCCTGTACTTCGCCCTCGGCCTGCGCAGCCTGTACGAGCACGCGCAGCCGGTG GCCCGCGCGCTGCGTCTGGGTGACCTGGCCCTGGCGCGCGAGCGCGTCGGCTGGATGGTCAGCCGCAATACCGCCGAGCTGGACGCAACCGGGGTGGCCC GTGCCGGCACCGAATCGGTGCTGGAGAACGGCTCCGACGCCGTGTTCGCCGCCTTGTTCTGGTTCATCGTCGCTGGCGCGCCGGGCGTCGTCCTGTACCG CCTGAGCAACACGCTCGATGCCATGTGGGGCTATCGCAACGAACGCTTCGAGCGTTTTGGCTGGGCCGCGGCGAAGATCGATGACGTGCTCAATTACATC CCGGCGCGCCTGGTGGCGCTGACCTATGCGCTGCTTGGGCGTACTGCCCTGGCCCTGCGCTGCTGGCGCCGGCAGGCGCCCTTGTGGGACAGTCCCAATG CTGGCCCAGTGATGGCTGCTGGTGCCGGAAGCCTGGCCGTTAGTCTGGGCGGTGCGGCCGAGTATCACGGCGAGGTGCATGAACGCCCACAACTGGGCGA AGGTCCACCGCCGCGGGCGCGGGATATCGAACGGGCGATGAACAGGGTTATCGCCGGGGTTGGCTTGTGGCTGTTATGCCTGATCGTCTGGGAGGTGCTG GGTGCTTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ACATGGAGGTCGTCTGCGCGCAGCGGCGCAGCGCTATGGCATCCCGCTGGAGGACTGGCTGGATCTGTCCACCGGGGTCGCACCCTACGGTTGGGACCTA CCGGCGGTACCGGGCTCTGCCTGGGCGCGCCTGCCTGAAGCGGACGACGGCCTGGAGCAGGCGGCGCGCGATTATTACGGCGCCGTCAGCCTGCTGCCGG TAGCCGGCTCGCAGGCGGCGATCCAGGCCCTGCCACGTCTGCGCGCGAACAGCAGCGTGGGTATCCTCGCACCGACCTATGCCGAGCACGCCGCCGCCTG GCGACGCGAGGGGCATCGGGTGATCAAGCTGAGCGAGGGCTCGGTGCATCGCGCGCTGCCGCAAGTGGATGTACTGCTGGTGGTCAACCCCAACAATCCG ACCGGCCGCCTGATCGAGCCGGCGCGCCTGCTCGACTGGCACGATGAACTGGCCGAGCGCGGCGGCTGGCTGGTGGTCGACGAAGCCTTCATCGATTGCA
Amino Acid Sequence
>cobalamin biosynthesis protein CobD
MSLALITCAGVALDAVLGEPRRAHPLVAFGRLAGRLEQRFNPAGGGWRSHGVTAWCLAVLPLTLLTWLLVHLTSLGWAVEIFALYFALGLRSLYEHAQPV ARALRLGDLALARERVGWMVSRNTAELDATGVARAGTESVLENGSDAVFAALFWFIVAGAPGVVLYRLSNTLDAMWGYRNERFERFGWAAAKIDDVLNYI PARLVALTYALLGRTALALRCWRRQAPLWDSPNAGPVMAAGAGSLAVSLGGAAEYHGEVHERPQLGEGPPPRARDIERAMNRVIAGVGLWLLCLIVWEVL GA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site