Strain | Pseudomonas mendocina EGD-AQ5 contig5, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GATGCGCTGACCGAGCAGGGCTGGACGCAACTGCGCGCAGCGGTGCAGGACGCCGGCCCCTGGGATCGCCTGATCAGCTCGCCACTGCAGCGTTGCGCGC GGTTTGCCGAGGAAGTCGCGCTGGCCAATGCCTTGCCGCTGCACTACGAGGCGGATCTGCAAGAGCTGCATTTCGGTGATTGGGAAGGGCGCACTGCTGC ACAGCTGATGGACAGCGATGCTGAGGCGCTGGGTCGCTTCTGGGCCGATCCCTATGCGTTCACACCGCCTAATGGCGAGCCGTTGCTGCAGTTCGAAGCG CGTGTGCTGGCTGCCTTGCGGCGCTTGCAGCAGCGCCATGCGGGAGAGCGGCTGCTGTTGATCACTCACGGCGGTGTGATGCGCCTGCTGCTGGCGCGCG CGCGTGGCCTGCCACGCCAGGATCTGCTGCAGGTCAACGTCGGCTATGCCCAGCGTTTTCGTCTGAGCCTGGATGCCGATGGGCAACTGGCTGAGTTGCC
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DNA Sequence for Gene |
>O203_RS43905
ATGATCGCGTTGCTGATCGCCCTGCAGTTCCTCACTCGTCTGCCGGTCAGCCTGCCGGGCATGCCCACGCCCGAGCAGGTGGGGCGCTCGCTGCTTTGGT ACCCACTAGTGGGGCTGCTGCTCGGCCTGCTGCTGTGGGGCGCTCATCTGCTGTTGGGGCAGACACCGGCGTTATTGCAGGCGGCGATCATTCTGGCGTT GTGGGTGGGGTTGAGCGGCGGCCTGCATCTGGACGGCCTGGCCGATACCGCTGATGCCTGGGTCGGCGGTTTCGGTGATCGCGAGCGCACTCTGACGATC ATGAAGGACCCGCGCAGCGGTCCCATTGCGGTGGTAGTGCTGGTGCTGCTGTTACTGCTCAAGTTCGCCGCATTATTCACGCTCCTGCAGGCCGGGCAGG GTATCTACCTGTTGCTGCTGCCCTGGCTGGGGCGCAGCCTGTTGCCGTTGCTGCTGGCAACCACGCCCTACGTGCGGGCCGGTGGGCTGGGTCAGGCCCT GGTCGATCATCTGCCACGCGGGCAACTGCCCTGGGTGCTGGGCGTGCATCTACTGGGCATGCTGCTGTTCGGCTGGGCGGGGCTGCTGGCGTTGGCCACG GCATTGCTGCTGTTCGTCTGGCTACGCCGCGTGTTGCTGCTACGCCTGGGCGGCACTACCGGAGATACCGCCGGTGCCCTGGTCGAACTGGCCGAGTGCG CCGTGCTCCTGACGCTGGCCCTGAGTCTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TCTCAACTGTTATGGCGAGGCGGTGGGCAACTGTATGAGTGCCAATCGCCGATGCGGGTATATACCTGTATCCATGTTGCCGACCTCCTGTCTCTGTACC CAACTGCGCCGCGCCAGCCGCGGTGTCACCCGCCGTTACGACGATGCCCTCGCGGCCGTCGGGCTCGGTGCCGCGCAGTTTTCCCTGTTGCGTCATGTGC AGCGGCTCGGTCAACCGAGCATTTCCCTGTTGGCTGAAGCCATGGGGCTCGATCGCAGCACGCTCGGGCGCAACCTGCGGGTGCTGGAGGAACAGGGGCT GGTGCAACTGGGAGAAGGGCGCGATTTGCGCGCTCGCGAGGTACGGCTCACAGAAGCCGGCCTGCAACGCATCGAACAGGCGCTGCCGCTGTGGGAACAG GTGCAGCGTGAACTCAATGCCCGGTTAGGCGCAGATCGTCGTGCCGAGCTGATGAGGCTGCTCGAAGAACTGGCCTGATGGCCGCATCACTGCCTACACG
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Amino Acid Sequence |
>cobalamin synthase
MIALLIALQFLTRLPVSLPGMPTPEQVGRSLLWYPLVGLLLGLLLWGAHLLLGQTPALLQAAIILALWVGLSGGLHLDGLADTADAWVGGFGDRERTLTI MKDPRSGPIAVVVLVLLLLLKFAALFTLLQAGQGIYLLLLPWLGRSLLPLLLATTPYVRAGGLGQALVDHLPRGQLPWVLGVHLLGMLLFGWAGLLALAT ALLLFVWLRRVLLLRLGGTTGDTAGALVELAECAVLLTLALSL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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