Pseudomonas mendocina EGD-AQ5, O203_RS43795
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas mendocina EGD-AQ5 contig5, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TCGCGCAAGGTGCGCGGGTCTTCGTCGAGCTCGGTTACATGCTCGCTCTGACGCCCTTTCCACCAACGCTCGATGGGCCAGCGAACAGCGACGAACAACA GATACACGGCAAGCGCGATCAGGCTGTAGAGCGCCAGATCAGCGACCGCGCGCCAGGCGTTGTTGCCAACCTTGAGCAATATATCCATGGCGGTAACCGC GAGAGCCGGCGCGAACAGTTCGCGCGCCGGGTCGACGATGGTCGGGCTGAACAGCAGCACGGCCATCAGCACCCGCAGCGGCTCGCGCAGGTAGCGCCAC ATCCAGCTGGTCAGGCGCATCCATACCAACAGGCAACCCAGGGCGGCAATCCCGTAGGCCGCCCAGGCCAGGAGGTAGTCGTTTTCATTCATCATAAGCA GGCGCCGGCGTGGCAGGTCTGGCAAAGGGGCGCTTATGATAGCGGCTTTTGCCCAGCGCGGCGCCCCTGCCGTCGCCCTCTCGTTCTCTGGAGCCACGCC
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| DNA Sequence for Gene |
>O203_RS43795
ATGTCCTCTGCCCCCATCGCCCGCCAGGAAGCCGGCAACGACCCTTATCACTGGCTGGAAAACCGCGACAGTGACGAGGTGCTGGCGCACCTGCAGGCAG AAAACGCCTATTTGGACGCCGTGCTGGAACCGCAGCAGGCCCTGCGCGAGCAGCTGTTCGAAGAGATCAAGGGGCGCATTCGCGAGACCGACCTGTCGCT GCCGACGCCCTGGGGCGACTACCTCTACTACCAGCGCACCACCGCCGGGGACGAATATCCGCGGCACTATCGTTGCCGTCGCCCTGCCGATGGTTCGCTG GATGTCGACGCGGCCAGTGAAGCGCTGCTGCTCGACCCCAACGAACTGGCCGGTGGCGGCTTTCTTTCCGTCGGTGCGTTCAGCATCAGCCCCGACCAGC AGCGCCTGGCCTACAGCCTCGACAGCAGCGGCGAGGAAATCTACCGCCTGTTCGTCAAGGAACTGGACAGCGGCCAGATCAGCGAACTGCCCTTCGACGA CTGCGACGGCAGCATGACTTGGGCGGGCGACAGCCAGACGCTGTTCTTCACCGAACTGGACGACACCCACCGCCCCTACAAGCTCTACCGTCACCGCCTC GGCGACGCCGCTGCGCAAGCCGTATTCGAGGAAGCAGATGGCCGCTTCTTCCTGCACTGCTACCGCTCCAGCTCCGAGCGCCAGTTGATCCTGCAACTGG GCAGCAAGACCACCAGCGAGGTCTGGGTGCTCGACGCGCAACAGCCGCAAGGCGATTTCAGCTGCCTGGCACCGCGCGAGGAAGGCCACGAATACGATGT CGATCACGGTATGCTGGACGGCCAGTGGTGCTGGCTGATCCGCAGCAATCAGAGCGGCATCAACTTCGCGCTCTACCGCGCCAGTGAGTCGCAGCCGCAG CGCCCGCACTGGCAACAGATTCGCGCCCACGACCCGCAGGTGATGCTCGAAGGCGCCACGCTGAACCAGCGCGCGCTCACCCTTGCCCTGCGTGAGGGCG GCCTGCCGATTCTGGAGGTGCAGCCGCAGGGCGCCGAAGCCTATCGCGTGCAACTGCCGGACGCCGCTTACAGCCTCTACGTGCAGGACAGCCTGGAGTT TCACAGCCCGGTGATCCGCCTGCGCTACGAAGCGCTGAACCGCCCCGCGCAAGTGCGCCAACTGGAACTGGCCACGGGCGCTCAGCAGGTCCTCAAGCAG ACACCGGTGGAAGGCCCGTTCGATGCCGACGCCTACGAAAGTCGGCGTCTCTGGGCCACCGCGGCCGACGGCACGCAGATACCGATCAGCCTGGTGGCGC GCCGCGAGGTATTCGCCGCAGGGAAGCCTGCACCGCTCTATCTCTATGGTTACGGCGCCTATGGCGCGAGCCTCGACCCCTGGTTCTCCCACGCCCGCCT GAGCCTGCTGGAGCGCGGTTTCGTCTTCGCCATCGCGCACATACGCGGTGGCGGCGAGATGGGCGAAGCCTGGTACCGTGCCGGCAAGCTCGAGCACAAA CAGAACAGCTTCGACGACTTCATCGCCAGCGCCCAGCGCCTGATCGCCGAAGGTCTGACCACCAGCGCGCAACTGGCGATCAGTGGTGGCAGCGCCGGAG GCCTGCTGATCGGCGCCGTGCTCAACCAGCGCCCCGAGCTGTTCGCTGCTGCGATTGCCGAAGTGCCTTTCGTCGATGTGCTCAACACCATGCTCAACCC GGACCTGCCGCTGACCGTCACCGAATACGACGAATGGGGCGACCCGAATCAGCCCGAGGTATACGCACGTATCAAGGCCTACGCGCCCTACGAGAACGTA CGCGCCCAGGCCTACCCGCCCATCCTCGCCGTCGCAGGCTACAACGACAGCCGCGTGCAGTACTGGGAAGCGGCCAAGTGGGTGGCCAAGCTGCGCCGCG ACAAGACCGACGCCAATCTGCTGCTGCTCAAGACCGACCTAGGCGCTGGCCATGGCGGCATGAGTGGGCGTTATCAGGGCATCAAGGATGTGGCGCTGGA ATACGCCTTTCTGTTCCGTGTGCTCGGGATAGCAGAGCCGTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GAGCGGTTGGGCGGCATTCCGCTTCAGCCGCGATTCCCCAAGCATCGCGGCTGAAGCCGCTCCTACGCCGATCACTCCGCCTTGCGCTGCCCGTCCAGCC CTTGGCTATTGCGGCGCAGTTGCTCATCAAGCTGCGGAATCGATTGATCGCCAGTGGATTTCGGCGCAGTCCCTGAGGGTGTTTGTCCCTGGGGCGGCGG TAAGAGGGGCGCCGATCCCTGGCGCTTGATCGTAGTGGGCGTGGAAGGCTGGCCGTAAGGCTGTGGCGTCGCAGTGCCCGGCGCACCTGCCCCAGGCGCG GACGGCATGCGCATCGGTTCCTGAGCCCAGGCCAAGCCGGCAAGGCTGGAGGCCAGAATCATCACGGCGAACATAGGCAAGCGCATGACATATCTCCTGT ACAGCTGGCTTTCGTTCTATTCTGGCAACATATCCAGTCAAGCGTTCACCTCCCGATAACAGGTTCTGTCATGAGCACCAATAACAACCGCTACTACCTG
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| Amino Acid Sequence |
>peptidase S9
MSSAPIARQEAGNDPYHWLENRDSDEVLAHLQAENAYLDAVLEPQQALREQLFEEIKGRIRETDLSLPTPWGDYLYYQRTTAGDEYPRHYRCRRPADGSL DVDAASEALLLDPNELAGGGFLSVGAFSISPDQQRLAYSLDSSGEEIYRLFVKELDSGQISELPFDDCDGSMTWAGDSQTLFFTELDDTHRPYKLYRHRL GDAAAQAVFEEADGRFFLHCYRSSSERQLILQLGSKTTSEVWVLDAQQPQGDFSCLAPREEGHEYDVDHGMLDGQWCWLIRSNQSGINFALYRASESQPQ RPHWQQIRAHDPQVMLEGATLNQRALTLALREGGLPILEVQPQGAEAYRVQLPDAAYSLYVQDSLEFHSPVIRLRYEALNRPAQVRQLELATGAQQVLKQ TPVEGPFDADAYESRRLWATAADGTQIPISLVARREVFAAGKPAPLYLYGYGAYGASLDPWFSHARLSLLERGFVFAIAHIRGGGEMGEAWYRAGKLEHK QNSFDDFIASAQRLIAEGLTTSAQLAISGGSAGGLLIGAVLNQRPELFAAAIAEVPFVDVLNTMLNPDLPLTVTEYDEWGDPNQPEVYARIKAYAPYENV RAQAYPPILAVAGYNDSRVQYWEAAKWVAKLRRDKTDANLLLLKTDLGAGHGGMSGRYQGIKDVALEYAFLFRVLGIAEP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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