Pseudomonas mendocina EGD-AQ5, O203_RS39565 (fabG)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas mendocina EGD-AQ5 contig3, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TCCTCTGCGCCACGTTCGCCGACCAATAGCGAACATTTGGCGTCCTGCCCGAGATTATGGGTGTGCTGGGCGATGCGGCTGATCAGGATCAGTGGGCGAC CCTCGGCGTCCAGGCAGTAGGGCACCACCGATCCGAAAGGGAAACCCGGCATGGCCTTGGAGTGGGTGCTGAGCACGCCACGGTATTCCTTGAGCAGCAA TTCTCGTGCATGCTTGCCGGCTTTAACGCTCACCTATATGGCTCCTCGCAAAGAATCCGTAGGAACCTGTTCACGGTCAGCTGCGCGTCGGCGCTACTGC GTTAAAAACAGGCTCGGAATGCTCATTTACAACTCGTAAAGTCGTGCGCGACTCCGAGCGTTCCTCGCCTGTTTTTGCCTTGTATCGCTCTAGCTCGCAA GACCGTGAACAGATTCCTAATAAACGGACAGACGCCCTAGCATAGCGGTTAGCGGGCATCAGCGGGGTCGGTAAATGCTGCACCTTGAGGGGATAAAGCG
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| DNA Sequence for Gene |
>O203_RS39565
|fabG
ATGCAACTGAAAGACAAAGTCATCATCATCACTGGCGGATGCCAGGGGCTGGGTCGCGCCATGGGTGAGTACCTGGCGGCCAAGGGCGCCAAGCTGGCGC TGGTCGATCTGAATCAGGAAAAACTCGACGAAGCCGTGGCTGCCTGCAAGGCCGCCGGTGGCGATGCCCGCAGCTACCTGTGCAACGTCGCCGATGAAGA GCAGGTGACCCATATGGTCGCCCAGGTGGCCGATGACTTCGGCGCCATCAACGGTCTGGTCAACAACGCCGGCATCCTGCGCGATGGCCTGACCATCCGC GTGAAAGATGGCGAAATGACCAAGATGAGCCTGGCGCAGTGGCAGGCGGTGATCGATGTCAACCTGACCGGCGTGTTCCTCTGCACCCGTGAAGTGGCGG CGAAGATGATCGAGCTGGGCAACCAGGGCGCCATCGTCAACATTTCCTCGATCTCCCGTGCCGGCAACATGGGCCAGGCCAACTACTCCGCAGCCAAGGC GGGCGTGGCTGCCGACACCGTGGTCTGGGCCAAGGAACTGGCGCGTTACGGCATCCGCGTCGCGGGTGTGGCGCCGGGCTTCATCGAAACCGAAATGACC GGCAGCATGAAGCCGGAAGCGCTGGAGAAGATGACTTCGGGCATTCCGCTCAAGCGCATGGGCAAGCCGACCGAGATCGCCCATTCGGTGGCCTACATTC TGGAAAACGACTACTACACGGGTCGCATTCTGGAGCTGGACGGCGGCCTGCGTCTGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCCGCCAGGCCTGAACGCAAAACGCCCCGACTGGTTCGGGGCGTTTTTGTTTGTGGCGGTGCCGTGTATCGCGAACCCGTAGCCCGGATGTAATCCGGGA ATGGCCATATCCCGTAAACCCGCCCCGAATTGCATCCGGGCTACCTGTCTCGATTTCGTCGGGCTTAGTGTGTACGCGCGACAGCGAAACGGCTCAGCTC GATCAGTGCATCGCGATATTCGCCGGCCGGCAGTACTTCCAGGCAGGCAATGGCGCGTTCGGCGTAGTCGCGGGCGAGTTGTGCGGTGTACTCCAGAGCG CCAGCGGCATCCACGGCGGCGCGGATGCTTTCCAGGTCTTCGATACCGCCTTTCTGAATCGCACGGCGTACCAGGGCGGCCTGTTCCTCGGTGCCTTCGC GCATGGTGTAGATCAGCGGCAGGGTTGGCTTGCCTTCGGCCAGGTCGTCACCGACGTTCTTGCCCAGTTCGGCCGCGTCGCCCTTGTAGTCGAGCAGGTC
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| Amino Acid Sequence |
>3-ketoacyl-ACP reductase
MQLKDKVIIITGGCQGLGRAMGEYLAAKGAKLALVDLNQEKLDEAVAACKAAGGDARSYLCNVADEEQVTHMVAQVADDFGAINGLVNNAGILRDGLTIR VKDGEMTKMSLAQWQAVIDVNLTGVFLCTREVAAKMIELGNQGAIVNISSISRAGNMGQANYSAAKAGVAADTVVWAKELARYGIRVAGVAPGFIETEMT GSMKPEALEKMTSGIPLKRMGKPTEIAHSVAYILENDYYTGRILELDGGLRL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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