Pseudomonas aeruginosa UCBPP-PA14, PA14_54300 (recO)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006310 DNA recombination
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR33991
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006281 DNA repair
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR33991
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

DNA replication, recombination, modification and repair Other UCBPP-PA14 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pau03440 Homologous recombination 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Hamap MF_00201 DNA repair protein RecO [recO]. IPR003717 Recombination protein O, RecO 3 228 19.606817
Gene3D G3DSA:2.40.50.140 - IPR012340 Nucleic acid-binding, OB-fold 5 74 1.3E-16
NCBIfam TIGR00613 JCVI: DNA repair protein RecO IPR003717 Recombination protein O, RecO 11 145 3.2E-18
SUPERFAMILY SSF57863 ArfGap/RecO-like zinc finger IPR037278 ARFGAP/RecO-like zinc finger 84 142 1.7E-8
Pfam PF02565 Recombination protein O C terminal IPR003717 Recombination protein O, RecO 81 222 3.6E-20
SUPERFAMILY SSF50249 Nucleic acid-binding proteins IPR012340 Nucleic acid-binding, OB-fold 10 73 1.71E-11
PANTHER PTHR33991 DNA REPAIR PROTEIN RECO IPR003717 Recombination protein O, RecO 6 230 9.7E-50
Gene3D G3DSA:1.20.1440.120 - IPR042242 Recombination protein O, C-terminal 78 230 2.2E-46
Pfam PF11967 Recombination protein O N terminal IPR022572 DNA replication/recombination mediator RecO, N-terminal 7 73 2.4E-14

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.