Pseudomonas mendocina EGD-AQ5, O203_RS35150

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas mendocina EGD-AQ5 contig11, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CAGATCGCGCCGCCGCGCGAACTCTACGAAGCGCCGCATAACACCTTCGTCGCTCAGTTCATTGGCGAGAACAATCGTCTGACTGGCGAGTTGGTCAGTC GCGATGGCGAGCAGTGCGTGGTGCGCCTGGCGCGAGGTGAAGAAGTGCGCGCCACGGCGGTCAACGTCGGTGCCGTGGGTGAGTCGGTGAGCCTGTCGAT CCGCCCCGAGCGCATCCGTCTCAACGGCCACAGCGAAGCCTGCCCGAACCGTTTCTCCGGGCGCATCGCCGAGTTCATCTACCTGGGCGATCACGTGCGT ATCCGCCTGGAGGTCTGCGGCAAAACCGATTTCTACGTCAAGCAACCCGTGGCCGAGCTCGATCCGGCGCTGGCGGTTGGTGACCTGGTTCCGCTCGGCT GGTCTGTCGAGCATGTCCGCGCGCTGGATCCACTCCAAGTCGAGTGAGCCTTTCGCGCAGTGCTTCACCTTTACCCCGTAACACAGAGGAGCTGATAAGA
DNA Sequence for Gene
>O203_RS35150
ATGACGAAATCCCTGAAGCTCGCGGCGTTGGCCCTGGGCGTTAGCTGTGCCATGCCGGCACTGGCGGTGGACCTGACGGCGGTTTCCTTCGGCGGCGCGA ACAAGGCGGCGCAGGTCAAGGCCTTCTACGAACCCTTCGAGAAGGAAACCGGCAACAAGGTGCTGGGCGGCGAATACAACGGTGAAATGGCCAAGGTCAA AGCCATGGTCGACACCCGCAGCGTGAGCTGGGACCTGGTCGAGGTGGAGTCGCCGGAGCTGGCCCGCGGTTGCGATGAAGGCCTGTTCGAGGAGCTCGAC CCGGCGCAGTTCGGCGATGAAGCCAACTTCATCGACGGCGCCATCCAGCCTTGTGGCGTGGGCTTCTTCGTCTGGTCCACGGTGCTGGCCTACAACGCCG ACAAACTCAGCGCGGCGCCGACCAGTTGGGCCGATTTCTGGGACGTGGCGAAATTCCCGGGCAAGCGCGGCCTGCGCAAGGGCGCCAAGTACACCCTGGA ATTCGCCCTGATGGCCGACGGCGTGCCGGTCAAGGACGTGTACAAGGTGCTCGCCACCAAGGAAGGTCAGGATCGCGCATTCAAGAAACTCGATGAGCTC AAACCGAACATCCAGTGGTGGGAAGCTGGCGCTCAGCCGCCGCAGTACCTCGCCTCCGGCGACGTGGTGATGAGCTCGGCGTACAACGGCCGCATCGCGG CGGTGCAGGGCGAGAGCAACCTGCAGGTGGTGTGGAACGGCGGCATCTACGACTTCGACTCCTGGGCCATCCCGCGTGGCGCCAAGAATGCCGAACTGGC CAAGGAATTCATCGCCTTCTCGGTCAAGCCCGAGGCGCAGAAGATCTACTCGGAGAACATCGCCTACGGCCCGGCCAACAAGCAGGCCATCGAGCTGCTG GCGCCGGAGCGTCTGAACCTGATGCCGACCACGCCGGAAAACATCGCCAACCAGGTGGCCATCGACGTGACCTTCTGGGCTGACTACGGCGAGCAGCTGG AGCAGCGCTTCAACGCCTGGGCCGCGCGCTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GTCGCCTATCCGGCCCCGCCTCGTGGCGGGGCCGTCTGAATTTCTTTCTTGCTTGCGGAGTTGTCCATGGCCGCCGTACTGCCTGCCAATGATTTGCCCG GGCCGAGCCTGAAGCAGCGACTGGCTCGTGCCGAGCGTTTCAATCGTCTGAAATCCAAGGCGCTGATCCTGCCGCTGTTGCTGTTCCTTCTGCTGACCTT CCTGCTGCCCATCGGCGCCTTGCTGCTGCGCAGTGTGGACAACCCGGAAGTGGTCGGCAGCCTGCCGCGCACCGTCGAGGCGATTGCTGCCTGGGATGGC CGTGGCCTGCCGGATGAGGCGGTGTACCGGGCGATTGCCAGCGATATGCTCGAAGCGCGGCGTAACCAGAGCCTGGGCGATCTGTCCAAGCGCTTGAACA TGGAGCTGGCGGGCTTCCGTAGCCTGGTCAGCGCGACCGCACGCAAGCTGCCGCTGCGCGAGGCGCCGGCGTCCTACCAGGAAGCCTTCCTCGATATGGA
Amino Acid Sequence
>spermidine/putrescine ABC transporter substrate-binding protein
MTKSLKLAALALGVSCAMPALAVDLTAVSFGGANKAAQVKAFYEPFEKETGNKVLGGEYNGEMAKVKAMVDTRSVSWDLVEVESPELARGCDEGLFEELD PAQFGDEANFIDGAIQPCGVGFFVWSTVLAYNADKLSAAPTSWADFWDVAKFPGKRGLRKGAKYTLEFALMADGVPVKDVYKVLATKEGQDRAFKKLDEL KPNIQWWEAGAQPPQYLASGDVVMSSAYNGRIAAVQGESNLQVVWNGGIYDFDSWAIPRGAKNAELAKEFIAFSVKPEAQKIYSENIAYGPANKQAIELL APERLNLMPTTPENIANQVAIDVTFWADYGEQLEQRFNAWAAR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site