Pseudomonas mendocina EGD-AQ5, O203_RS33645
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas mendocina EGD-AQ5 contig1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGCGGACTCTCATGTCGCCATCCCGCTCGACGAGCGCAGTCTCGATGATATCCGCGCTTGCGACATGCAGCCGTTCAAGCGTCTGGTGCACGAGCTCGAT GCAGTGATGCCGGCGCATGTCATCTATTCTCAGGTTGACGAGCACCCGGCTGGCTTCTCCCGTCGCTGGCTGCAGGACATCTTGCGCGGCGAGTTGGGCT TCGAGGGTGTGATTTTCAGCGACGACCTGTCCATGGCCGGTGCCCATGTGGTCGGCGATGCCGGCAAGCGTATCGAGGCGGCACTGGCTGCGGGGTGCGA TATGGGCCTGGTGTGCAATGACCGCGCTTCGGCCGAACTGGCGCTCAGTGCCTTGCAGCGTCTGCGAGTGACAGCGCCTGCGCGCCTCGAACGCATGCGT GGCCGTGGTTATGCCACTACCGAATACCGCCAGGTGCCACGCTGGCTTACCGCTGTGGCGGCCCTGAGAGCTGCACAGTTGCTCGACTGAGGATCTGCCT
|
|
| DNA Sequence for Gene |
>O203_RS33645
ATGACTGTCTACGCCATTATCGGCGGCACCGGCCTGACCCAGCTGGAAGGGTTGACGATTCACGAAGCGCTGCCGCTGGATACCCCTTACGGGGCGCCCT CCGCCGATATCCTGCGGGGCAGTTACGCCGGGCGCGAAGTGCTGTTTCTCGCCCGCCATGGCCAGCCGCACCGGATTCCTCCGCATCAGGTGAACTACCG GGCCAACCTCTGGGCGCTCAAGCAGGCCGGCGCCAAGGCCATTGTCGCGGTCAATGCGGTGGGGGGGATTCATGCTGCCATGGGCGCTGGGCATTTCTCC GTGCCACATCAGATCATCGATTACACCTCCGGGCGTGCGCACACCTTTTACGAAGGCGATCTGGAGCACGTGACCCACGTCGATTTCAGTCAGCCGTACG ACAGGCAACTGCGCGAGGCTTTGGTGGCGGCGCTGCGGGCCGAAAATGCGGCATTCAGCGATCACGGAATCTATGGCTGCACTCAGGGGCCGCGACTGGA AACGGCGGCGGAAATAGCCCGCATGGAGCGCGATGGCTGCGACCTGGTAGGCATGACCGGCATGCCCGAAGCGGTGTTGGCGCGCGAATTGGCGCTGCCC TATGCCTGCCTGGCGCTGGTGGTGAATCCGGCGGCGGGGAAATCCAGCGCGCTGATCACTATGGCCGAGATCGAGCGAGTGATCGAGCAGAGCATGGGGA CGGTCAAGGCGGTGTTGGCACGCGTGCTGAGTAACTAG
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
CTTCTCTACACAAGGCAGCGGTCAATGCCCGTCAGTCAGGCGTCGACGCGCCGAATCCGTAGGCGCGGCGCCCCGCCGCGAATCAGGGCGGAGCGCACTT GAAAAACTTCGCCCTGGGGCGAGGCTCCTACGCAAGGCTGGCGGCATCAGATTTCCGCTCAGAGCGGGCTGATGCGTACCAGTGCGCCCAGGCTGCCATG GTCCAGGTAGGTCAGGCTGTTGTCCTTCAGGCGCTGAGCCACTTTCATGTGCTCGCTGCTCTCGAGCAGGCCGTCGCCGCTGAATTGGTTGATCCACAGC TCCAGGTCCAGGTCGGCAAAGCGCTCCTGAGTAAAGCTCAGGGTGCCTTCGACCACGTGATGGCCGAAACGCTCTTCACCGCTGCTGACGGCCACTCGGC TCGGCGAGCTGCCGATGGTCTGGCTCCAGGCCTTGTGCAGCAATACCTGATAACCGCTGCCCGGATTGAGCTTGGCCGCCTCGCCATCTAGCGTTGTCGG
|
|
| Amino Acid Sequence |
>5'-methylthioadenosine phosphorylase
MTVYAIIGGTGLTQLEGLTIHEALPLDTPYGAPSADILRGSYAGREVLFLARHGQPHRIPPHQVNYRANLWALKQAGAKAIVAVNAVGGIHAAMGAGHFS VPHQIIDYTSGRAHTFYEGDLEHVTHVDFSQPYDRQLREALVAALRAENAAFSDHGIYGCTQGPRLETAAEIARMERDGCDLVGMTGMPEAVLARELALP YACLALVVNPAAGKSSALITMAEIERVIEQSMGTVKAVLARVLSN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|