Pseudomonas mendocina EGD-AQ5, O203_RS31315
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF51126 | Pectin lyase-like | IPR011050 | Pectin lyase fold/virulence factor | 45 | 334 | 7.53E-49 |
| NCBIfam | TIGR01901 | JCVI: filamentous hemagglutinin family N-terminal domain | IPR008638 | Filamentous haemagglutinin FhaB/tRNA nuclease CdiA-like, TPS domain | 75 | 149 | 1.2E-23 |
| SMART | SM00710 | pbh1 | IPR006626 | Parallel beta-helix repeat | 541 | 585 | 5000.0 |
| SMART | SM00912 | Haemagg_act_2a | IPR008638 | Filamentous haemagglutinin FhaB/tRNA nuclease CdiA-like, TPS domain | 41 | 153 | 7.4E-38 |
| PANTHER | PTHR12338 | AUTOTRANSPORTER | - | - | 44 | 532 | 5.2E-46 |
| Pfam | PF05860 | TPS secretion domain | IPR008638 | Filamentous haemagglutinin FhaB/tRNA nuclease CdiA-like, TPS domain | 43 | 294 | 1.9E-38 |
| SMART | SM00710 | pbh1 | IPR006626 | Parallel beta-helix repeat | 855 | 885 | 640.0 |
| SMART | SM00710 | pbh1 | IPR006626 | Parallel beta-helix repeat | 887 | 909 | 140.0 |
| SMART | SM00710 | pbh1 | IPR006626 | Parallel beta-helix repeat | 687 | 719 | 2600.0 |
| Gene3D | G3DSA:2.160.20.10 | - | IPR012334 | Pectin lyase fold | 44 | 422 | 5.1E-105 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.